LOCUS BDN80125.1 484 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii hypothetical protein protein.
ACCESSION AP026367-340
PROTEIN_ID BDN80125.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NJB1907Z4_C03400"
/note="frameshifted, insertion/deletion at around
366413,366349,366352,366416,366419,366395,366364"
/transl_table=11
BEGIN
1 MSYVVAASDL LASTATELAR IDAALNTANA AAVLPTTVLQ AAGADEVSAA VAALFSSHAR
61 AYQALSVQAG QFHQWFTQTL SGAGLAYASA EAANVSPLQV LERDVLGLVN APAQALLGRP
121 IIGNGADGAP GSGANGADGG ILIGNGGTGG SGAPGQNGGA GGNAGLPGSG GTGGVGGAGA
181 TGGTGGTGGL LWGNGGIGGQ GGTAMVGVNG GSPGHGGNGG NAFLFGDGGT GGQGGTGLAG
241 ADGVNPTPTG TAGTGAAGGN VSGNGPLTGG NGDTGDTGGT GETGGTGGAG GSATASSGSA
301 TGGKGGAGGD PGGGANGGAG GAGGDAESFS GQAHGGTAGG GGTGGDGGRG GLLIGSGGNG
361 GTGGTGGTGG TGDATAASSA TGGHGGDGGD SDPSVGTGGN GGTGGNGGNG GAGGQWRWRR
421 RRRCWWDRRH RRCGGARAPG AASVETEAPV EASAVTAAPA LIRWPSVVGA ASAVGAVTPG
481 PVAC
//