LOCUS BDN80060.1 692 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii hypothetical protein protein.
ACCESSION AP026367-275
PROTEIN_ID BDN80060.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NJB1907Z4_C02750"
/note="codon on position 105 is selenocysteine opal
codon."
/transl_table=11
BEGIN
1 MPQGIRQQAA RHRCATGNHG ALPAPYATEW QDLDLETAMD MVADRVLDAR SKGWQDFDAD
61 RHTLRRTLGI ASLGGATLDN EENYLIKKLF TALGALQIEN QARIUHSATV PGLGASFGRG
121 GATDYQQNLA TSDFIVIMGS NMAEAHPVGF QWVIEAKTRG AQVIHIDPRF TRTSAVADRH
181 VPLRAGSDIA FLGGVINYIL SNDLDFREYV TAYTNAPFLV DEDYCDAEDL DGLFSGYDHA
241 SASYDPATWR YQPGDHADPT LQHPRCVYQI LKRHYARHTP EMVERVCGVP AQSFLQVARA
301 WTENSGRERT TALVYTVGWT QHSMGAQFIR AGSIIQLLLG NIGRPGGGIF ALRGHASIQG
361 STDVPTLFNL LPGYLDMPYA GQATLSDYLD NIKSRNQKGF WHNADAYMVS LLKEYWGEHA
421 TADNDYCFDY LPRINGDHST YRTVMDMIDG KVFGYFLLGQ NPAVGSAHGR MQRLGMANLD
481 WLVVRDLVMI ESATFWKEAP EVETGEISPQ TCRTEVFFFP AASHVEKAGT FTQTQRLLQW
541 REKAVDPPGD ARSELWFFYH LGRKLREKLS GSTDERDRPL LQLAWDYATE GDEPSGADVL
601 RHMNGIDLGT GRTIDGYPSL KADGSTACGC WIYSGVYADE VNQAARRKPR DEQRPYENEW
661 GWTWPLNRRV LYNRASADPQ GRPWSERKKL VW
//