LOCUS       BDN79985.1               347 aa    PRT              BCT 09-FEB-2023
DEFINITION  Mycobacterium pseudoshottsii ATP-dependent DNA ligase protein.
ACCESSION   AP026367-200
PROTEIN_ID  BDN79985.1
SOURCE      Mycobacterium pseudoshottsii
  ORGANISM  Mycobacterium pseudoshottsii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (bases 1 to 6051062)
  AUTHORS   Komine,T., Fukano,H. and Wada,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUN-2022)
            Contact:Takeshi Komine
            Nippon Veterinary and Life Science University, School of
            Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
            Japan
REFERENCE   2
  AUTHORS   Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
            Kurata,O. and Wada,S.
  TITLE     Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
            pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
            Japanese Sardine (Sardinops melanostictus) in Japan
  JOURNAL   Microbiol Resour Announc 11 (12), e00785-22 (2022)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/mra.00785-22
COMMENT     Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Flye v. 2.9; galaxy v. 0
            Genome Coverage       :: 189x
            Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019-07-10"
                     /db_xref="taxon:265949"
                     /geo_loc_name="Japan:Tokyo"
                     /host="Sardinops melanostictus"
                     /isolation_source="liver of Japanese sardine"
                     /mol_type="genomic DNA"
                     /organism="Mycobacterium pseudoshottsii"
                     /strain="NJB1907-Z4"
     protein         /gene="ligC"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:RefSeq:WP_003420435.1"
                     /locus_tag="NJB1907Z4_C02000"
                     /transl_table=11
BEGIN
        1 MLAKAVKTIP ADASYEPKWD GFRSICFRDN DEVELGSRNE RPLTRYFPEL VAAVRAELPR
       61 RCVLDGEIVI ATGHGLDFEA LQQRIHPADS WVRMLAEHTP ASFIAFDLLA LGDDDYTTRP
      121 FVERRAALVE AVGSGPSIHV TPATTDQATA RRWFEEFEGA GLDGVIAKPL AVTYQPDKRV
      181 MFKIKHERTA DCVLAGYRLH KSGGDVIGSL LLGLYQDDGQ LASVGVIGAF PMAERRRLFT
      241 ELQELVTSFD DHPWNWAAHQ SGERTPRKNE FSRWNAGKDL SFVPLRPERV VEVRYDHMEG
      301 PRFRHTAQFN RWRPDRDPRS CTYAQLEQPL TFSLDDIVAG LGPRCGH
//