LOCUS BDN79939.1 745 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii isocitrate dehydrogenase,
NADP-dependent protein.
ACCESSION AP026367-154
PROTEIN_ID BDN79939.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="icd2"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003899797.1"
/locus_tag="NJB1907Z4_C01540"
/transl_table=11
BEGIN
1 MSAEQPTIIY TLTDEAPLLA TYAFLPIVRA FAEPAGIQIK TSDISVAARI LAEFPDYLTD
61 EQRVPDNLAE LGELTQDPDT NIIKLPNISA SVPQLKAAIK ELEDKGYAIP DYPADPKTDE
121 EKALKERYAR CLGSAVNPVL RQGNSDRRAP NAVKEYARKH PHSMGEWSMA SRTHVAHMRH
181 GDFYAGEKSI TLDRAHKVKM ELVTKGGQTL VLKPEVSLDD GDIIDSMFMS KKALCEFYEE
241 QIEDAYKTGV MFSLHVKATM MKVSHPIVFG HAVKTFYRDA FAKHQKLFDE LGVNVNNGLS
301 DLYSKIETLP ASQHDEIIDD LHRCHEHRPE LAMVDSARGI TNFHSPSDVI VDASMPAMIR
361 AGGKMYGADG KLKDTKAVNP ESTFSRIYQE IINFCKTNGQ FDPTTMGTVP NVGLMAQQAE
421 EYGSHDKTFE VPEDGVANIV DLDTGEVLLT QDVEAGDIWR MCVVKDAPIR DWVKLAVTRA
481 RNSGMPVLFW LDPYRPHENE LIKKVKTYLK DHHTEGLDIQ IMSQVRSMRY TLERLIRGLD
541 TIAATGNILR DYLTDLFPIL ELGTSAKMLS IVPLMAGGGM YETGAGGSAP KHVKQLVEEN
601 HLRWDSLGEF LALGASLEDM GIKIGNDRAK ILARTLDDAI GKLLGNNKSP SRKTGELDNR
661 GSQFYLALYW AQELAEQTDD AELAEHFAKL AKALADGEEA IVAELAEAQG EAVDIGGYYA
721 PDNEKTTAVM RPSKTLNAAL EAAQG
//