LOCUS BDN79788.1 385 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii DNA replication and repair
protein RecF protein.
ACCESSION AP026367-3
PROTEIN_ID BDN79788.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="recF"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P9WHI9"
/locus_tag="NJB1907Z4_C00030"
/transl_table=11
BEGIN
1 MYVRHLGLRD FRSWAHADLE LGPGRTVFVG PNGFGKTNII EALWYSATLG SHRVGTDAPL
61 IRAGADRAVI STIVVNDGRE CAVDLEIAAG RANKARLNRS PVRSTREVIG VLRAVLFAPE
121 DLALVSGDPA DRRRYLDDLA TLRRPTIAGV RADYDKVLRQ RTALLKSVSG ARFRGDRGAL
181 DTLDVWDSRL AQHGAELMAA RIDLVRLLAP EVEKAYQLLA PESRSAAIAY RASMDAFVAA
241 DDAAPDRVTL EEGLLAALAA RRDAELERGV CLVGPHRDDL ELRLGDQPAK GFASHGESWS
301 MAVALRLAAF ALLRADGSEP VLLLDDVFAE LDAARRTALA RVAESAEQVL VTAAVLEDIP
361 SGWDARKVHI DLRDSADGRV SAVQS
//