LOCUS BDD33649.1 468 aa PRT BCT 07-DEC-2021
DEFINITION Escherichia coli putative HTH-type transcriptional regulator
YdcR protein.
ACCESSION AP025220-2275
PROTEIN_ID BDD33649.1
SOURCE Escherichia coli
ORGANISM Escherichia coli
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE 1 (bases 1 to 4733210)
AUTHORS Yamaguchi,T. and Kawahara,R.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2021)
Contact:Takahiro Yamaguchi
Osaka Institute of Public Health, Division of Microbiology;
Higasinariku nakamichi 1-3-69, Osaka, Osaka 537-0025, Japan
REFERENCE 2
AUTHORS Yamamoto,Y., Higashi,A., Ikawa,K., Yamaguchi,T., Kawahara,R.,
Nguyen,T.N., Khong,D.T. and Tran,H.T.
TITLE Horizontal transfer of mcr-1 marked with a single nucleotide
mutation between clinical isolates from community residents
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.4.8
Genome Coverage :: 124x
Sequencing Technology :: MGI DNBSEQ-G400RS; ONT MinION Mk1c
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /db_xref="taxon:562"
/mol_type="genomic DNA"
/organism="Escherichia coli"
/strain="2017.11.01CC"
protein /gene="ydcR"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P77730"
/locus_tag="VEGS20_A22750"
/transl_table=11
BEGIN
1 MKKYQQLAEQ LREQIASGIW QPGDRLPSLR DQLALSGMSF MTVSHAYQLL ESQGYIIARP
61 QSGYYVAPQA IKMPKAPVIP VTRDEAVDIN TYIFDMLQAS RDPSVVPFAS AFPDPRLFPL
121 QQLNRSLAQV SKTATAMSVI ENLPPGNAEL RQAIARRYAL QGITISPDEI VITAGALEAL
181 NLSLQAVTEP GDWVIVENPC FYGALQALER LRLKALSVAT DVKEGIDLQA LELALQEYPV
241 KACWLMTNSQ NPLGFTLTPQ KKAQLVALLN QYNVTLIEDD VYSELYFGRE KPLPAKAWDR
301 HDGVLHCSSF SKCLVPGFRI GWVAAGKHAR KIQRLQLMST LSTSSPMQLA LVDYLSTRRY
361 DAHLRRLRRQ LAERKQRAWQ ALLRYLPAEV KIHHNDSGYF LWLELPEPLD AGELSLAALT
421 HHISIAPGKM FSTGENWSRF FRFNTAWQWG EREEQAVKQL GKLIQERL
//