LOCUS BDD33557.1 330 aa PRT BCT 07-DEC-2021
DEFINITION Escherichia coli autoinducer 2 import system permease
protein LsrD protein.
ACCESSION AP025220-2183
PROTEIN_ID BDD33557.1
SOURCE Escherichia coli
ORGANISM Escherichia coli
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE 1 (bases 1 to 4733210)
AUTHORS Yamaguchi,T. and Kawahara,R.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2021)
Contact:Takahiro Yamaguchi
Osaka Institute of Public Health, Division of Microbiology;
Higasinariku nakamichi 1-3-69, Osaka, Osaka 537-0025, Japan
REFERENCE 2
AUTHORS Yamamoto,Y., Higashi,A., Ikawa,K., Yamaguchi,T., Kawahara,R.,
Nguyen,T.N., Khong,D.T. and Tran,H.T.
TITLE Horizontal transfer of mcr-1 marked with a single nucleotide
mutation between clinical isolates from community residents
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.4.8
Genome Coverage :: 124x
Sequencing Technology :: MGI DNBSEQ-G400RS; ONT MinION Mk1c
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /db_xref="taxon:562"
/mol_type="genomic DNA"
/organism="Escherichia coli"
/strain="2017.11.01CC"
protein /gene="lsrD"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P0AFS2"
/locus_tag="VEGS20_A21830"
/transl_table=11
BEGIN
1 MRIRYGWELA LAALLVIEIV AFGAINPRML DLNMLLFSTS DFICIGIVAL PLTMVIVSGG
61 IDISFGSTIG LCAIALGVLF QSGVPMPLAI LLTLLLGVLC GLINAGLIIY TKVNPLVITL
121 GTLYLFAGSA LLLSGMAGAT GYEGIGGFPM AFTDFANLDV LGLPVPLIIF LICLLVFWLW
181 LHKTHAGRNV FLIGQSPRVA LYSAIPVNRT LCALYAMTGL ASAVAAVLLV SYFGSARSDL
241 GASFLMPAIT AVVLGGANIY GGSGSIIGTA IAVLLVGYLQ QGLQMAGVPN QVSSALSGAL
301 LIVVVVGRSV SLHRQQIKEW LARRANNPLP
//