LOCUS BCK86928.1 1356 aa PRT BCT 29-DEC-2022
DEFINITION Sideroxyarcus emersonii DNA-directed RNA polymerase subunit
beta protein.
ACCESSION AP023423-682
PROTEIN_ID BCK86928.1
SOURCE Sideroxyarcus emersonii
ORGANISM Sideroxyarcus emersonii
Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
Nitrosomonadales; Gallionellaceae; Sideroxyarcus.
REFERENCE 1 (bases 1 to 2738141)
AUTHORS Kato,S., Itoh,T. and Ohkuma,M.
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2020)
Contact:Shingo Kato
RIKEN BioResource Research Center, Japan Collection of
Microorganisms; 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan
REFERENCE 2
AUTHORS Kato,S., Itoh,T., Iino,T. and Ohkuma,M.
TITLE Sideroxyarcus emersonii gen. nov. sp. nov., a neutrophilic,
microaerobic iron- and thiosulfate-oxidizing bacterium isolated
from iron-rich wetland sediment
JOURNAL Int. J. Syst. Evol. Microbiol. 72, 005347 (2022)
REMARK Publication Status: Online-Only
DOI:10.1099/ijsem.0.005347
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.4.7
Genome Coverage :: 250x
Sequencing Technology :: Illumina MiSeq; Oxford Nanopore
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2018-04-20"
/culture_collection="JCM:39089"
/db_xref="taxon:2764705"
/geo_loc_name="Japan:Ibaraki, Tsukuba"
/isolation_source="pond sediment"
/mol_type="genomic DNA"
/organism="Sideroxyarcus emersonii"
/strain="MIZ01"
/type_material="type strain of Sideroxyarcus emersonii"
protein /locus_tag="MIZ01_0698"
/transl_table=11
BEGIN
1 MSYSFTEKKR IRKSFAKRVG ALPVPFLLST QLESYSDFLQ AWVAPEQRKN QGLQAAFNSI
61 FPIESHTKFA RLDFVSYTLG MPPFDVRECQ QRGLTYASPL RARVRLTLLD KEASKPTVKE
121 VKEQEVYMGE IPLMTHTGSF VINGTERVIV SQLHRSPGVF FEHDRGKTHS SGKLLFSARV
181 IPYRGSWLDF EFDAKDFVYF RIDRRRKMPV TILLKSLGYT PEQILAMFFQ FDTFHFGKKG
241 IQFEVVPERL RGEIARFDIE GKGGKVIVAK DKRITVRHIR EMQEAGIDKL TVGEDFLVGR
301 VLAQNIVDKD SGEIIANAND EITETLLGKL EAAGVAKINT LYTNDLDQGG FISQTLRTDE
361 TTDQWTARVA IYRMMRPGEP PTEDAVEALF NGLFFNEDRY DLSAVGRMKF NRRVGRDELT
421 GPVTLSNEDI VEVIRILVEL RNGRGEIDDI DHLGNRRVRA VGELAENQFR TGLARVERAV
481 KERLGQAEAD NLMPHDLINA KPISAAVKEF FGSSQLSQFM DQTNPLAEVT HKRRISALGP
541 GGLTRERAGF EVRDVHPTHY GRVCPIETPE GPNIGLINSL ALYARTNEYG FIETPYRKVA
601 KSRALDDVEY LSAIEESKFT IAQANAELDK KGHFTNDIVS ARQHNEFVLA EPDKIEYMDV
661 APAQVVSVAA SLIPFLEHDD ANRALMGANM QRQAVPVLRA EKALVGTGIE RTVAVDSGTA
721 VQAWRGGRVD YVDSGRIVVR VNDDETTAGE VGVDIYNLTK YTRSNQNTNI NQRPLVRVGD
781 VIARGDVVAD GASTDMGELA LGQNMMVAFM PWNGYNFEDS ILISERVVAE DRFTSIHIEE
841 LTVMARDTKL GTEEITRDIP NLSEAQMARL DECGIVHIGA EVGVGDVLVG KVTPKGETQL
901 TPEEKLLRAI FGEKASDVKD TSLRVKAGIS GTVIDVQVFT REGLQRDKRA QQIIDDELAR
961 YKKDLADQMR IVEADLFARL EKLLHNKVAN GGPKKLAKGT KLNKEYLHSI EHHQWFDIRV
1021 ADDDVAAQLE QVKEALAQKR VEFDAAFELK KKKLTQGDEL QAGVQKMVKV YVAVKRRLQP
1081 GDKMAGRHGN KGVVSRIVPV EDMPRMADGT TVDVVLNPLG VPSRMNIGQV LEVHLGWAAK
1141 GLGKKISQML DAQAKIADVR KFLGKIYKGD QADEIATFSD EEVIELCRNL RAGVPFATPV
1201 FDGASEEEIK DLLELADLPR SGQIQLYDGR TGDAFDRKVT VGYMHVLKLH HLVDDKMHAR
1261 STGPYSLVTQ QPLGGKAQFG GQRFGEMEVW ALEAYGAAYT LQEMLTVKSD DVNGRTKVYE
1321 NIVKGEHKID AGMPESFNVL TKEIRSLGID IDLERH
//