LOCUS BBM01406.1 284 aa PRT BCT 17-JUL-2019
DEFINITION Microbulbifer sp. GL-2 RNA polymerase sigma factor RpoH protein.
ACCESSION AP019807-1480
PROTEIN_ID BBM01406.1
SOURCE Microbulbifer sp. GL-2
ORGANISM Microbulbifer sp. GL-2
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE 1 (bases 1 to 4950731)
AUTHORS Sugimoto,Y., Onishi,K. and Suzuki,S.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2019)
Contact:Yuta Sugimoto
Ehime University, Center for Marine Environmental Studies;
Bunkyo-3, Matsuyama, Ehime 790-8577, Japan
URL :http://web.arg.ehime-u.ac.jp/~mme/
REFERENCE 2
AUTHORS Sugimoto,Y., Onishi,K. and Suzuki,S.
TITLE Complete Genome Sequences of Microbulbifer sp. Strain GL-2
Isolated from intestine of Girella melanichthys.
JOURNAL Unpublished
COMMENT Annotated at DFAST https://dfast.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: HGAP v. 3
Genome Coverage :: 144x
Sequencing Technology :: PacBio SMRT
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2014-06-10"
/db_xref="taxon:2591606"
/geo_loc_name="Japan:Ehime, Uwa sea"
/host="Girella melanichthys"
/isolation_source="fish intestine"
/mol_type="genomic DNA"
/organism="Microbulbifer sp. GL-2"
/strain="GL-2"
protein /gene="rpoH"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P42378"
/locus_tag="GL2_14800"
/transl_table=11
BEGIN
1 MGTSLQPVHT LSPGANLGAY IQTVSGFDVL TAEEEKRLAE DLYYREDINA ARQLVMSHLR
61 FVVHIAKSYS GYGLNQADLV QEGNVGLMKA VKRFNPEKGV RLVSFAVHWI KAEIHEFILR
121 NWRIVKIATT KAQRKLFFNL RGQKKKLAWL SNDEAKAVAK DLNVDVTQVQ EMEGRLAAHD
181 AAFDAGADDD DDTAWQAPAH YLEDRSFDPA AQLERDNWQE TNLSSLASAM EQLDERSRDI
241 IQARWLTEDK STLHELADKY GVSAERIRQL EKNAMKKVRA AMEA
//