LOCUS BBM00798.1 1357 aa PRT BCT 17-JUL-2019
DEFINITION Microbulbifer sp. GL-2 DNA-directed RNA polymerase subunit
beta protein.
ACCESSION AP019807-872
PROTEIN_ID BBM00798.1
SOURCE Microbulbifer sp. GL-2
ORGANISM Microbulbifer sp. GL-2
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE 1 (bases 1 to 4950731)
AUTHORS Sugimoto,Y., Onishi,K. and Suzuki,S.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2019)
Contact:Yuta Sugimoto
Ehime University, Center for Marine Environmental Studies;
Bunkyo-3, Matsuyama, Ehime 790-8577, Japan
URL :http://web.arg.ehime-u.ac.jp/~mme/
REFERENCE 2
AUTHORS Sugimoto,Y., Onishi,K. and Suzuki,S.
TITLE Complete Genome Sequences of Microbulbifer sp. Strain GL-2
Isolated from intestine of Girella melanichthys.
JOURNAL Unpublished
COMMENT Annotated at DFAST https://dfast.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: HGAP v. 3
Genome Coverage :: 144x
Sequencing Technology :: PacBio SMRT
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2014-06-10"
/db_xref="taxon:2591606"
/geo_loc_name="Japan:Ehime, Uwa sea"
/host="Girella melanichthys"
/isolation_source="fish intestine"
/mol_type="genomic DNA"
/organism="Microbulbifer sp. GL-2"
/strain="GL-2"
protein /gene="rpoB"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:Q51561"
/locus_tag="GL2_08720"
/transl_table=11
BEGIN
1 MAYSYTEKKR IRKDFGKLPK VMDVPFLLAI QLDSYRNFTQ ADKRPDDRVD VGLQAAFKSV
61 FPIVSYSGNA ALEYVSYTLG KPAFDVKECT LRGVTYACPL RVRVRLIIYD KESANKSIKD
121 IKEQEVYMGE IPLMTDNGTF VINGTERVIV SQLHRSPGVF FDHDKGKTHS SGKLLYAARV
181 IPYRGSWLDF EFDPKDLVFV RIDRRRKLPA TILLRALGFS SQEMLEMFFE SSKFELHDDH
241 VSLELIPSRL RGDVASFDIK DGQGKVIVEE GRRITPRHIR QLEKAGVEKL EAPLEYLFSR
301 VLANDIIDES TGEIAVECNT EITAEVIAQL RELNIKSFET LYTNDLDRGP FISDTLRADP
361 SRTQLEALVE IYRMMRPGEP PTKESAESLF ENLFFTDERY DLSAVGRMKF NRRLGREDET
421 GAGTLSKEDI VDVLKTLIFI RNGQGMVDDI DHLGNRRVRS VGEMAENQFR VGLVRVERAV
481 KERLSMAESE GLMPQDLINA KPVAAAVKEF FGSSQLSQFM DQNNPLSEVT HKRRVSALGP
541 GGLTRERAGF EVRDVHPTHY GRVCPIETPE GPNIGLINSL ATYARANHYG FLESAYRKVV
601 DGKVTDEIEY LSAINEANYV IAQASAAVDD EGSFTDDLVS VRHHNEFALK APAEIQYMDV
661 SAKQVVSVAA AMIPFLEHDD ANRALMGSNM QRQAVPTLRA EKPLVGTGME RTVARDSGVC
721 VVAKRGGVIE RVDSSRVVVR VADAEVEAGD AGVDIYNLTK YIRSNQNTCI NQRPIVSTGD
781 RVSRGDILAD GPSVDLGELA LGQNMRIAFM PWNGYNFEDS ILISERVVQE DRFTTIHIQE
841 LTCIARDTKL GSEEITADIP NVGESALNKL DESGIVYIGA EVGAGDILVG KVTPKGEAQL
901 TPEEKLLRAI FGEKASDVKD TSLRAPSGTR GTVIDVQVFT RDGLQKDQRS IDIEKAQLDE
961 VRKDLNEEYR IVEGATFERL QQALRDQKAA GGKGISKGQE LTAELLAALP REDWFKLRME
1021 DESLNEQLEK AEVQLKERRK LLDEAFEDKK KKLESGDDLA PGVLKIVKVY LAIKRRIQPG
1081 DKMAGRHGNK GVISVIKPVE DMPYDQNGEP VDIVLNPLGV PSRMNVGQVL EMHLGMAAKG
1141 LGVKVDKMIK EQQEIAKVRG FLEEVYNSTG GRKEELDEFS DEEVMTMAQN LRRGVPMATP
1201 VFDGADESEI KHLLRLADIP DSGQITLHDG RTGDAFERPV TVGYMYMLKL NHLVDDKMHA
1261 RSTGSYSLVT QQPLGGKAQF GGQRFGEMEV WALEAYGAAY TLQEMLTVKS DDVEGRTKMY
1321 KNIVDSDHRM EPGMPESFNV LVKEIRSLGM NFELEHE
//