LOCUS BBM00797.1 1409 aa PRT BCT 17-JUL-2019
DEFINITION Microbulbifer sp. GL-2 DNA-directed RNA polymerase subunit
beta' protein.
ACCESSION AP019807-871
PROTEIN_ID BBM00797.1
SOURCE Microbulbifer sp. GL-2
ORGANISM Microbulbifer sp. GL-2
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE 1 (bases 1 to 4950731)
AUTHORS Sugimoto,Y., Onishi,K. and Suzuki,S.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2019)
Contact:Yuta Sugimoto
Ehime University, Center for Marine Environmental Studies;
Bunkyo-3, Matsuyama, Ehime 790-8577, Japan
URL :http://web.arg.ehime-u.ac.jp/~mme/
REFERENCE 2
AUTHORS Sugimoto,Y., Onishi,K. and Suzuki,S.
TITLE Complete Genome Sequences of Microbulbifer sp. Strain GL-2
Isolated from intestine of Girella melanichthys.
JOURNAL Unpublished
COMMENT Annotated at DFAST https://dfast.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: HGAP v. 3
Genome Coverage :: 144x
Sequencing Technology :: PacBio SMRT
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2014-06-10"
/db_xref="taxon:2591606"
/geo_loc_name="Japan:Ehime, Uwa sea"
/host="Girella melanichthys"
/isolation_source="fish intestine"
/mol_type="genomic DNA"
/organism="Microbulbifer sp. GL-2"
/strain="GL-2"
protein /gene="rpoC"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:Q9HWC9"
/locus_tag="GL2_08710"
/transl_table=11
BEGIN
1 MKDLLNLVKS QEHLEEFDAI RIGLASPDMI RSWSYGEVKK PETINYRTFK PEREGLFCAK
61 IFGPVKDYEC LCGKYKRMKH RGIICEKCGV EVTKAKVRRE RMGHIELASP VAHIWFLKSL
121 PSRIGLLLDM TLRDIERVLY FESYVVTEPG MTTLERGQLL NDEQYFEAME EFADEFEAKM
181 GAEAIQELMS DIELPAEIQR LREEIPATNS ETKIKKLSKR LKLLEAFYKS GNNPEWMIMQ
241 ALPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLELNAPDI IVRNEKRMLQ
301 ESVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVIVVGPT
361 LRLHQCGLPK KMALELFKPF IFGKLESRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP
421 VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTIEAQLES
481 RALMMSTNNI LSPANGEPII VPSQDVVLGL YWMTRERVND KGEGMFFSDI KEVSRAFYAK
541 QVGLQAKVKV RIREKILGED GEKHETISVQ DTTVGRALLW NIVPEGLPFE LVNQPMKKKS
601 ISRVLNECYR KVGLKATVIF ADQLMYTGFD FSTKSGSSIG VNDFEIPAEK AELIDAAEAE
661 VKEIETQFAS GLVTQGEKYN KVIDVWSRTN DKVTQAMMAG IKKEKVIDRE GKETKQDSFN
721 SVFMYADSGA RGSEAQIRQL AGMRGLMARP DGSIIENAIT ANFREGLTVQ QYFISTHGAR
781 KGLADTALKT ANSGYLTRRL VDVAQDVVIT EVDCGTDDGL TMAPVIEGGD VIESLGDRIL
841 GRVVARDVLK PGSEEIAVSA GTMIDEKWVE RIEAMGIDEV LVRSPISCTT SHGICAQCYG
901 RDLARGHRAN SGESVGVVAA QSIGEPGTQL TMRTFHIGGA ASRASAADSI QIKQSGTVRL
961 HNLKTVKTEV GTLVAVSRSG ELAIADSAGR ERERYKLPYG AVISVYEGAE VDGGKIVAKW
1021 DPHTHPIITE VAGWVKLSGM EDGLSIRKQT DEITGLSSIE VIDPAERPAA GKDLRPAVTL
1081 VDENGNELTL ANSNAPAHYA LPPRAILSLA DGNKVNVGDV IARIPQESGG TKDITGGLPR
1141 VADLFEARKP KEPSILAEIS GTVSFGKETK GKVRLQITPR DGKPLANGKD HYEVLIPKHR
1201 QLTVFEGETV EKGEVISDGP SNPHDILRLK GVEELARYIT NEIQEVYRLQ GVGINDKHIE
1261 TIVRQMLRKV EITEMGDSGF IKGDQVEYQR VIEENEQLRA ENKQPAQFER LLLGITKASL
1321 ATESFLSAAS FQETTRVLTE AAVTGKEDSL RGLKENVVVG RLIPAGTGLA YHAERKRKRS
1381 LQLEESFGEG PSAAEVEAAL TEALKSSGE
//