LOCUS BBE04605.1 1152 aa PRT BCT 11-OCT-2019
DEFINITION Klebsiella pneumoniae transcription-repair-coupling factor protein.
ACCESSION AP018671-3323
PROTEIN_ID BBE04605.1
SOURCE Klebsiella pneumoniae
ORGANISM Klebsiella pneumoniae
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
pneumoniae complex.
REFERENCE 1 (bases 1 to 5478620)
AUTHORS Sekizuka,T., Yatsu,K., Nishio,M., Kishi,N., Inamine,Y. and
Kuroda,M.
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2018)
Contact:Tsuyoshi Sekizuka
National Institute of Infectious Diseases, Pathogen Genomics
Center; 1-23-1 Toyama, Shinjuku-ku, Tokyo 162-8640, Japan
REFERENCE 2
AUTHORS Sekizuka,T., Yatsu,K., Inamine,Y., Segawa,T., Nishio,M., Kishi,N.
and Kuroda,M.
TITLE Complete Genome Sequence of a blaKPC-2-Positive Klebsiella
pneumoniae Strain Isolated from the Effluent of an Urban Sewage
Treatment Plant in Japan
JOURNAL mSphere 3 (5), e00314-18 (2018)
REMARK Publication Status: Online-Only
DOI:10.1128/mSphere.00314-18
COMMENT Annotated by DFAST v.1.0.5 (https://dfast.nig.ac.jp)
##Genome-Assembly-Data-START##
Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon
v. 1.1.0; circlator v. 1.5.3; Pilon v.
1.18; SPAdes v. 3.11.1; A5-miseq v.
20140604
Genome Coverage :: 200x
Sequencing Technology :: Sequel; MiSeq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2017-08"
/db_xref="taxon:573"
/geo_loc_name="Japan:Tokyo"
/isolation_source="wastewater treatment plant effluent"
/lat_lon="35.6552 N 139.8335 E"
/mol_type="genomic DNA"
/note="ST11"
/organism="Klebsiella pneumoniae"
/strain="GSU10-3"
protein /gene="mfd"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:A0A0H3FRC8"
/locus_tag="KPGSU103_C33230"
/transl_table=11
BEGIN
1 MKPSMPEQYR YSLPVKAGDQ RQLGELTGAA CATLVAEMAE RHNGPVVLVA PDMQNALRLN
61 DEIRQFTDSM VMGLADWETL PYDSFSPHQD IISSRLATLY QLPTMQRGVL IVPVSTLMQR
121 VCPHSFLHGH ALVMKKGQRL SRDALRDQLE GAGYRHVDQV MEHGEYTTRG ALLDLFPMGS
181 DQPYRLDFFD DEIDSLRLFD VDSQRTLEEV AAINLLPAHE FPTDQTAIEL FRSQWRDRFE
241 VKRDAEHIYQ QVSKGTLPAG IEYWQPLFFS EPLPPLFSYF PASTLIVNTG DLEASAERFQ
301 NEARARFENR GVDPMRPLLP PELLWLRSDE LFSELKKWPR VQLKTERLAD KAANTNLGYQ
361 TLPDLAVQAQ NKAPLDNLRR FLESFTGPVI FSVESEGRRE ALSEMLARIK VAPKHVLRLE
421 EATGNGRYLM IGAAEHGFID SQRGLALICE SDLLGERVAR RRQDSRRTIN PDTLIRNLAE
481 LHIGQPVVHL EHGVGRYAGM TTLEAGGITG EYLMLTYAND AKLYVPVSSL HLISRYAGGA
541 EENAPLHKLG GDAWTRARQK AAEKVRDVAA ELLDIYAQRA AKAGFAFKHD REQYQLFCDG
601 FPFETTPDQA QAINAVLSDM CQPLAMDRLV CGDVGFGKTE VAMRAAFLAV ENHKQVAVLV
661 PTTLLAQQHY DNFRDRFANW PVRIEMLSRF RSAKEQAQIL EQAAEGKIDI LIGTHKLLQS
721 EVKLRDLGLL IVDEEHRFGV RHKERIKAMR ADVDILTLTA TPIPRTLNMA MSGMRDLSII
781 ATPPARRLAV KTFVREYDAL VVREAILRET LRGGQVYYLF NDVENIQKAA DKLAELVPEA
841 RIAIGHGQMR ERELERVMND FHHQRFNVLV CTTIIETGID IPTANTIIIE RADHFGLAQL
901 HQLRGRVGRS HHQAYAWLLT PHPKAMTTDA QKRLEAIASL EDLGAGFALA THDLEIRGAG
961 ELLGEDQSGQ METIGFSLYM ELLENAVDAL KAGREPSLED LTSQQTEVEL RMPSLLPDDF
1021 IPDVNTRLSF YKRIASAKNE QDLEEIKVEL IDRFGRLPDA VRNLLDIARL RQQAQKLGIR
1081 KLESNEKGGV IEFNEKNNVN PVWLIGLLQK QPQHFRLDGP TRLKFMQDLE ERKTRMDWVR
1141 QFMRQLEENA VA
//