LOCUS BBE02333.1 434 aa PRT BCT 11-OCT-2019
DEFINITION Klebsiella pneumoniae 23S rRNA (uracil(1939)-C(5))-methyltransferase
RlmD protein.
ACCESSION AP018671-1051
PROTEIN_ID BBE02333.1
SOURCE Klebsiella pneumoniae
ORGANISM Klebsiella pneumoniae
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
pneumoniae complex.
REFERENCE 1 (bases 1 to 5478620)
AUTHORS Sekizuka,T., Yatsu,K., Nishio,M., Kishi,N., Inamine,Y. and
Kuroda,M.
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2018)
Contact:Tsuyoshi Sekizuka
National Institute of Infectious Diseases, Pathogen Genomics
Center; 1-23-1 Toyama, Shinjuku-ku, Tokyo 162-8640, Japan
REFERENCE 2
AUTHORS Sekizuka,T., Yatsu,K., Inamine,Y., Segawa,T., Nishio,M., Kishi,N.
and Kuroda,M.
TITLE Complete Genome Sequence of a blaKPC-2-Positive Klebsiella
pneumoniae Strain Isolated from the Effluent of an Urban Sewage
Treatment Plant in Japan
JOURNAL mSphere 3 (5), e00314-18 (2018)
REMARK Publication Status: Online-Only
DOI:10.1128/mSphere.00314-18
COMMENT Annotated by DFAST v.1.0.5 (https://dfast.nig.ac.jp)
##Genome-Assembly-Data-START##
Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon
v. 1.1.0; circlator v. 1.5.3; Pilon v.
1.18; SPAdes v. 3.11.1; A5-miseq v.
20140604
Genome Coverage :: 200x
Sequencing Technology :: Sequel; MiSeq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2017-08"
/db_xref="taxon:573"
/geo_loc_name="Japan:Tokyo"
/isolation_source="wastewater treatment plant effluent"
/lat_lon="35.6552 N 139.8335 E"
/mol_type="genomic DNA"
/note="ST11"
/organism="Klebsiella pneumoniae"
/strain="GSU10-3"
protein /gene="rumA"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:A0A0H3FKG0"
/locus_tag="KPGSU103_C10510"
/transl_table=11
BEGIN
1 MAQFYSAKRR VTTRQIITVT VNDLDPFGQG VARHQGKALF VSGVLPHEQA EVALVEDKKQ
61 YARAEVKRRL TDSPQRQAPR CPHFGVCGGC QQQHASVPLQ QQSKRAALGR LMKREVDDVI
121 AGAPWGYRRR ARLSLNYQPK TQQLQMGFRQ ANAKAIVDVV QCPVLVPQLE ALLPAVRECL
181 SALSALRHLG HVELVQADNG PLMVLRHTAA LPATDREKLE RFSQTHGLSL YLAPQSEILE
241 HIHGEAPWYT SDGLRLVFSP RDFIQVNDGV NQQMVRTALE WLDLRPEDRV LDLFCGMGNF
301 TLPLATRAAH VVGVEGVPAL VEKGRENAAR NGLSNVTFFH ENLEEDVTRQ AWAKHGFDKV
361 LLDPARAGAP GVMPHIIKLA PRRVVYVSCN PATLARDSET LLQAGYQIQR LAMLDMFPHT
421 GHLESMVLFE RRLT
//