LOCUS BAK68584.1 418 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 transcription termination factor Rho protein.
ACCESSION AP012222-3909
PROTEIN_ID BAK68584.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="3.6.1.-"
/gene="rho"
/locus_tag="SLG_39090"
/note="protein synonym:ATP-dependent helicase Rho"
/transl_table=11
BEGIN
1 MHLKDLKRKA PAELVAMAEE LGVEGASTLR KQDLMFAILK EQAENGEQIM GLGTIEVLAD
61 GFGFLRSPEA NYLAGPDDIY VSPNQVRRFG LRTGDTVEGE IRAPKDGERY FALTKLVSVN
121 FDDPDVVRHR VNFDNLTPLY PDEKLKLDTL DPTVKDKSAR VIDIIAPQGK GQRALIVAPP
181 RTGKTVLLQN IAKAITDNHP EVFLLVLLID ERPEEVTDMQ RSVKGEVVSS TFDEPATRHV
241 QVAEMVIEKA KRLVEHKKDV VILLDSITRL GRAYNTVVPS SGKVLTGGVD ANALQRPKRF
301 FGAARNIEEG GSLSIIATAL IDTGSRMDEV IFEEFKGTGN SEIVLDRKVA DKRIFPALDV
361 GKSGTRKEEL LVEKDKLSKM WVLRRILMQM GTIDAMEFLL DKMKDSKTNE DFFATMNQ
//