LOCUS BAK68515.1 559 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 cytochrome c oxidase cbb3-type subunit
I protein.
ACCESSION AP012222-3840
PROTEIN_ID BAK68515.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="1.9.3.1"
/gene="ccoN"
/gene_synonym="ctaD"
/locus_tag="SLG_38400"
/note="protein synonym:cytochrome BB(3) subunit 1"
/note="protein synonym:cytochrome c oxidase polypeptide I"
/note="protein synonym:cytochrome c oxidase subunit 1"
/transl_table=11
BEGIN
1 MTGLTIRAGI FLFIALFAML AAALAADGGF AVHMTIVCAA ALIACWATIS GADYTAIARG
61 ILRVPDESRY DDDPIRWGVI ATVFWGLAGF LAGLYIALQL AFPALNLGLE YTSFGRLRPL
121 HTSAVIFAFG GNALIATSFY VVQRTCRARL AFPGLARFVF WGYQLFIVLA ATGYLLGITE
181 AREYAEPEWY VDLWLTIVWV AYLAVFVGTI IKRSEPHIYV ANWFYLSFIL TIAMLHIVNN
241 LSMPVSLLGS KSYSAFAGVQ DALTQWWYGH NAVGFFLTAG FLAMMYYFVP KQAERPIYSY
301 RLSIIHFWSL IFLYIWAGPH HLHYTALPDW AQTLGMVFSV MLWMPSWGGM INGLMTLNGA
361 WDKVRTDPII RMMVMALAFY GMSTFEGPML SIKSVNSLSH YTDWTIGHVH SGALGWNGMI
421 TFAAIYYLTP RLWGRERLYS LRMVNWHFWL ATVGIVFYAS AMWVSGIMQG LMWREYGADG
481 YLVYAFSDTV AAMLPMYLMR AFGGVLYLTG AILMAINVWR TIRGDLREEA PMTDAAFDPA
541 KDRPAIAPPA SAPHAQPAE
//