LOCUS BAK68506.1 440 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 oxygen-independent coproporphyrinogen
III oxidase protein.
ACCESSION AP012222-3831
PROTEIN_ID BAK68506.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="1.3.99.22"
/gene="hemN"
/locus_tag="SLG_38310"
/transl_table=11
BEGIN
1 MWSCHPDLLA RPVPRYTSYP TAAEFSAAVG SAQQEAALAR IAPDEPVSLY AHIPFCEEIC
61 WYCGCNTGRA NRAQRLTAYL DALCAEVETV AGRLGGRGKV GRIAFGGGSP NALSPDQFMR
121 LLATMRRAFD AEGADISIEL DPRTTSADWF AVLGRAGVTR ASLGVQTFDT AIQEAIGRVQ
181 PREMIVETVA ALRAQGVSSI NFDLMYGLPG QDRAHLSATL DETLALAPER IALFGYAHVP
241 HLLPRQRRIR ADNLPDQAER FAMAALGHDR LVAAGYVAVG FDHFALPHDP LALAAREGRV
301 RRNFQGFTDD QARILIGLGA TAISEFPDLL VQNEKNSGRY RMGALAGLLT GERGVARDRE
361 DQRRAAIIAD LLCGRAANVG AFLGDATIGQ GLAPFLERGL ASLEGEQLRI TEEGRPYGRV
421 IAVLFDRWRT QQPQRFSTAI
//