LOCUS BAK68492.1 757 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 NADP-dependent malic enzyme protein.
ACCESSION AP012222-3817
PROTEIN_ID BAK68492.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="1.1.1.40"
/gene="maeB"
/locus_tag="SLG_38170"
/transl_table=11
BEGIN
1 MTDTTSDKTT IEFSEREALL FHSAGRPGKI EIIASKPMAT QRDLALAYSP GVAVPVREIA
61 ENPQTAYDYT ARGNLVAVIS NGTAILGLGN LGALASKPVM EGKAVLFKRF ADVDAIDLEV
121 DTEDPQAFID AVALLEPSFG GINLEDIKAP ECFMIEAALK ERMNIPVMHD DQHGTAIICA
181 AGLINACHLT GRDISEARVV VNGAGAAAIA CTELIKALGV PHDNVTMCDR EGVIYQGRTH
241 GMDQFKSAHA VRTEARTLHE ALKGADIFLG LSAKDALRPE WIGEMNARPI IFAMANPDPE
301 ILPPVAKAAR PDAIVATGRS DYPNQVNNVL GFPFIFRGAL DVRATAINEA MKIAAAQAIA
361 SLAREQVPEE VALAYGKSHS FGADYIIPAP FDPRLMEVVP AAVAQAAMES GVAQQPIEDM
421 AAYRQTLRAR LNPTTSVLTL AYEGARAAPK RVLFAEAEEE VVLRAAIQFR DGGYGIPVLV
481 GRQDVYEKLR ELGVRDPESF ELYNSVNSPL VPKMVDALYE RLQRRGYLRR DCERMVNRDR
541 NIFGALLLKM GEADAMITGV TRTYAQTMRE LRRVIDPAPD RTCFGIHVLV GRSHTVFMAD
601 TTVNERPGAA ELADIAIGTA AVARRMGHEP RVAFLSYSTF GNPPGNWLDN IREAVGLLDQ
661 RNVDFEYEGE MAPDVALNAR VMQSYPFSRL SGPANVLVMP GLQSANLSAK LLRELGGDSV
721 IGPMLIGMGQ PVQIAAMAST ASELVTLAVL AAGGIAR
//