LOCUS BAK68435.1 698 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 penicillin-binding protein protein.
ACCESSION AP012222-3760
PROTEIN_ID BAK68435.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_37600"
/transl_table=11
BEGIN
1 MAKAQAVSRV RLWFFRLLKI GIALGIAGLI MLAIAVVIAM QSLPGFDALK SSPNGQMIRV
61 HAADGTVIVS LGPSYGRWLS YDQIPEVMTR ALVSVEDKRF YMHPGVDPIG MGRGAWRAFE
121 RRGQGRRIEG ASTITQQLAR NIFLNNSYSA GRKLREIVLA LAIERKFSKR EILELYLNKV
181 YFGGGAYGVD AASRKFFNHP ATELNLAEAA IIAGLVKAPS HYSPTADAEA ATGRAGVVLD
241 VMAANGDISQ AERAAVDLGS VEMVPEKAQD SVRYFTDWVL PQLDDLIDEQ EQPLDVYTTI
301 DLRLQRAAVA AIKGNVPSGA QGALVSLDRD GAVRALVGGL DYISSNYNRA TTAERQPGSA
361 FKLFVYLAAL ESGYSPDTRV NDSPVTINGW SPRNDNRKNV GEIDVRTAFA YSVNTVAAKL
421 GMEVGFASVA DMARRFGIST TINTHPSMVL GTSEVHLIDM TQAFASVARK GVAVRPYGIL
481 KVATADGEVL YEHKDDTSRV LVAPWVAAGM TDLMQTAVNT GTGRNAQIGR PVAGKTGTTS
541 SNKDGWFIGF SSGITTGVWM GRDDGRAVGG LAGGRAPARA FANYMKVAVA NRPVETFETE
601 VTLPEWQLEP DEEAYGQPDN GMMVDENGLP LDAPVAPETD STGETEQPTP PAAPAEAPQR
661 IDQRWIDEVL GRGQRTPPAS QPTPRPSPSQ AAPARPQG
//