LOCUS BAK68430.1 366 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 DNA polymerase IV protein.
ACCESSION AP012222-3755
PROTEIN_ID BAK68430.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="2.7.7.7"
/gene="dinB"
/locus_tag="SLG_37550"
/transl_table=11
BEGIN
1 MEAAPVQHRK IIHVDMDAFY ASVEQRDDPS LRGKPIAVGG GGPRGVVAAA SYEARVFGVR
61 SAMPGGQARR LCPELVFVRA RFDAYRAVSQ QIRGIFERFT DVIQPLSLDE AYLDVTQNKL
121 GIVSATYVAQ EIRRLIREET GLTASAGVSC NKLIAKLASD QNKPDGLCIV KPEEAEAFMA
181 AMPVGRIHGI GPVTARRMAT LGIHSGADLK AWPLPALQRH FGKSATFYHD AARGIDDRPV
241 RDRETRKSIS VEDTFESDIG AEGQLLAELE KIAARLWTRV IAARALGRTV TLKIKLGDFR
301 ILTRSRTLPA PPVNAEDLYA IGTDLLRAQL PLPIGARLLG LGLSNLVDPS AEEDEQEQVQ
361 LRLAFG
//