LOCUS BAK68429.1 486 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative dioxygenase protein.
ACCESSION AP012222-3754
PROTEIN_ID BAK68429.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_37540"
/transl_table=11
BEGIN
1 MAHFPQTPGF SGTLRPLRIE GDILDIEIEG EVPPQLNGTF HRVHPDAQFP PRFEDDQFFN
61 GDGMVSLFRF HDGKIDFRQR YAQTDKWKVE RKAGKSLFGA YRNPLTDDAS VQGMIRGTAN
121 TNVMVHAGKL YAMKEDSPCL IMDPLTLETE GYTNFDGKLE SQTFCAHPKI DPVTGNLCAF
181 AYGAKGLMTL DMAYIEISPT GELLKEIPFQ NPYYCMMHDF GVTEDYAVFA VMPLLSSWGR
241 LKQRLPFFGF DTTLPCYLGI LPRNGDARDL RWFKTGNCFV GHVMNAFNDG TKVHIDMPVS
301 RNNSFPFFPD VHGAPFDPVA GQGFLTRWTV DMASNGDSFE KTERLFDRPD EFPRIDERYA
361 TQAYRHGWML ILDTEKPYEG PGGAFYALTN TLGHIDLATG KSSSWWAGPR CAIQEPCFIP
421 RSPDAPEGDG YVIALVDDHV ANYSDLAIFD AQHVDQGPIA RAKLPVRIRQ GLHGNWADAS
481 RLAVAA
//