LOCUS BAK68421.1 891 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 aconitate hydratase 1 protein.
ACCESSION AP012222-3746
PROTEIN_ID BAK68421.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="4.2.1.3"
/gene="acnA"
/locus_tag="SLG_37460"
/transl_table=11
BEGIN
1 MTATGQDTLG TRDTLDVGGK RYGYYSLSKA AARFGDVSRL PFSMKVLLEN MLRFEDGVTV
61 TTDDVKAIID WQKNPVASDS EIQYRPARVL MQDFTGVPCV VDLAAMRDAM NALGADASKI
121 NPQVPVHLVI DHSVMVDEFG TPQAFEDNVA LEYQRNAERY EFLKWGSKAL DNFKVVPPGT
181 GICHQVNLEH IAQAIWTSVD AKGETVAYPD TCVGTDSHTT MVNGLGVLGW GVGGIEAEAA
241 MLGQPVSMLI PEVVGFKLTG ALAEGITATD LVLTVTQMLR AKGVVGRFVE FFGPGVSSLS
301 LADRATIANM APEYGATCGF FPIDGKTLDY MRLTGRDEDQ IALVEAYAKT QGFWLDPQAA
361 DPIFTDTLEL DMGSVTPSLA GPKRPQDKVV LTKVDDVFND DLSRIYNKAA AVRVPVEGKD
421 HDIGDGDVVI AAITSCTNTS NPSVLVAAGL VAKKAVEFGL KPKPWVKTSL APGSQVVTDY
481 LEKAGLQDYL NAVGFNLVGY GCTTCIGNSG PLAEPISKAI NGNDIVAASV LSGNRNFEGR
541 VSPDVRANFL ASPPLVVAYA LKGTVTTDFV ETPIGTGKDG QDVFLKDIWP SNDEIRSVMD
601 GAISREMFQS RYAGVFTGDN RWQAIDVTGS DTYAWRAGST YVANPPYFEG MEMTPAPVSD
661 ILDARPLAIF ADSITTDHIS PAGSIKASSP AGQWLQERQV APADFNSYGS RRGHHEVMMR
721 GTFANIRIRN LMLDGVEGGM TSYKGEVMPI YDAAMKHQAD GTPLVVIAGK EYGTGSSRDW
781 AAKGTRLLGV RAVVAESFER IHRSNLVGMG VLPLQFLDGV NRETLGLTGD ESFTIRNVGG
841 LKPRQMVTVE AKRADGTAFT FEALCRIDTV NELDYFLNGG ILPYVLRKLA A
//