LOCUS BAK68339.1 490 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative dioxygenase protein.
ACCESSION AP012222-3664
PROTEIN_ID BAK68339.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_36640"
/transl_table=11
BEGIN
1 MAHFPDTPGM TGVLRPLRIE GDILDLEVEG EIPAQLNGTF HRVHPDAQFP PRFEDDQFFN
61 GDGMVSLFRF HNGKIDFRQR YAQTDKWKVE RKAGKSLFGA YRNPLTDDAS VQGMIRGTAN
121 TNVMVHAGKL YAMKEDSPCL IMDPLTLETE GYTNFDGKLK NQTFSAHAKI DPVTGNFCNF
181 GYAATGLLTT DCSYFEIDPA GNLLFETEFQ VPYYCMMHDY GLTEHYAIFH IVPCTSNWDR
241 LKAGLPHFGF DTTLPVWLGV VPRGPGVTNK DVRWFKAPKT IFASHVMNAF EEGSKIHFDT
301 PQAENNAFPF FPDIHGAPFD PVAARPYLHR WTVDLGSNSE DFAEVRQLTN LIDEFPRLDE
361 RYVGQPYRHG WGLVMDPEME MEFARGRASG FKMNRIGHWD HATGKEDSWW CGPQSIIQEP
421 CFVPRTADSA EGDGYIIALV DNLITNYSDL VVLDALNLKD GPIGRAKLPI RLRSGLHGNW
481 ADASKLPIAA
//