LOCUS       BAK68310.1               919 aa    PRT              BCT 07-OCT-2016
DEFINITION  Sphingobium sp. SYK-6 putative ribonuclease E protein.
ACCESSION   AP012222-3635
PROTEIN_ID  BAK68310.1
SOURCE      Sphingobium sp. SYK-6
  ORGANISM  Sphingobium sp. SYK-6
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (bases 1 to 4199332)
  AUTHORS   Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
            Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
            Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
            Masai,E., Yamazaki,S. and Fujita,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2011)
            Contact:Director-General Department of Biotechnology
            National Institute of Technology and Evaluation, Biological
            Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
            Japan
            URL    :http://www.bio.nite.go.jp/
REFERENCE   2
  AUTHORS   Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
            Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
            Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
            Fukuda,M., Yamazaki,S. and Fujita,N.
  TITLE     Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
            Degrader of Lignin-Derived Biaryls and Monoaryls
  JOURNAL   J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: phred/phrap v. 0.020425.c
            Genome Coverage       :: 8.0x
            Sequencing Technology :: Sanger ABI3730
            ##Genome-Assembly-Data-END##
            
            Please visit our web site.
            URL:http://www.bio.nite.go.jp/
            
            DOGAN ; Database of Genomes Analyzed at NITE
            The database contains genome sequence data, physical maps
            and the genomic and proteomic data of the microorganisms
            analyzed.
            URL:http://www.bio.nite.go.jp/dogan/Top
            
            Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
            of Bioengineering, Nagaoka University of Technology.
FEATURES             Qualifiers
     source          /db_xref="NBRC:103272"
                     /db_xref="taxon:627192"
                     /mol_type="genomic DNA"
                     /note="strain coidentity: NBRC 103272"
                     /organism="Sphingobium sp. SYK-6"
                     /strain="SYK-6"
     protein         /EC_number="3.1.26.12"
                     /gene="rne"
                     /locus_tag="SLG_36350"
                     /note="protein synonym:RNase E"
                     /transl_table=11
BEGIN
        1 MTMRMLIDAR HREETRVAVV TGNRIEEFDF ESAEHKQLKG NIYLAKVTRV EPSLQAAFVD
       61 YGGNRHGFLA FSEIHPDYYQ IPREDREALL AEEAAHAAEE AALRAEDDDE HEGGSLDSGD
      121 VEVVERPDLG DDEDEDGEPS ESASGGQGGK ADNQAADEIR RKRMALRRRY KIQDVIRRRQ
      181 VLLVQVVKEE RGNKGAALTT YLSLAGRYCV LMPNTSHGGG ISRKISNSAD RKRLKSIIAD
      241 MNLPSTMGCI VRTAGLSRTK TEIRRDFDYL ARLWDEIRDK TLKSAAPALI HNDSDLIKRA
      301 IRDIYHRDIE EVIVEGEEGY RAAKDFMKLL MPSHARRVKQ YADVVSLFQR FGVEDQLAAM
      361 YNPVVQLKSG GYLVINPTEA LVSIDINSGR STREHNIEQT ATATNLEAAR EIARQLRLRD
      421 MAGLVVIDFI DMEHNSNIRK VEKAMKEALK DDRARIQVGR ISGFGLMEMS RQRLRTGVLE
      481 ASTRACPHCE GTGLVRTASS AGLSALRMLE EEAARGRGSI ITLRASQEAA FYVLNNKRRE
      541 LGEIENRYGV TIVILPDGEV EGARMSVEAS GPRPTMQISY APIVEDVEEE DDFVEEEDAE
      601 EEEAEEADES ARPTNGDQGE GRGKRKRRRR GRRGRRDGEE GASGAAGENE AEGDASEDAG
      661 EEGDREVAQS PAETAEGGED APRRSRRGRR GGRRRRGNMA DQGSDATVSD EAHEPAEAVA
      721 PEAAAESEAP AAEPVETPVE AEEPVAPRRR RRSRAAAPAT EAQPVEDAAE AAPEAEAEVV
      781 AVELSPELVE AAETPEVAEK PKRRSRKKAV PAAGEAPAEA PAEEAAPEAE KPAPKRRTRS
      841 KAAAAKAAPA EAVSESVAPE APAEPAAEAP ATDGPAAEAQ AAEAQEAGPA ISAQDDVALE
      901 DGGSEEPPRR GWWQRTFGA
//