LOCUS BAK68300.1 471 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 dihydrolipoamide dehydrogenase protein.
ACCESSION AP012222-3625
PROTEIN_ID BAK68300.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="1.8.1.4"
/gene="pdhD"
/locus_tag="SLG_36250"
/transl_table=11
BEGIN
1 MSESYDLIVL GSGPGGYVAA IRAAQLGLKT AIVERELLGG ICLNWGCIPT KALLRSAEIF
61 HYMSHAKDYG LAAEKISADI EAVVKRSRGV AKQLNAGVTH LMKKNKVAVH MGTGVLTAAN
121 TLTVTDKDGK KTELSAKHII VATGARARDL PFAPADGKRI WTYRTAMTPP EMPGKLLVIG
181 SGAIGIEFAS FYNDMGAEVT VVEMMDRIVP VEDADVSAFL EKQLVKRGMK IVTGAALDSL
241 KASDKGVTAA IKGKDGKTET SEFSHCIVAI GIVPNTENIG LEALGVTMER GHIKTDGLCR
301 TNVAGLWAIG DVTAPPWLAH KASHEGVTAA EAIAQALGNK DVHPHEMDPR NIPGCTYCQP
361 QVASVGLTEA KAKEAGYTVK AGTFPFIGNG KAIALGEAEG FVKTVFDAKT GELLGAHMVG
421 AEVTEMIQGY TIGKTAELVE ADFIQTVFPH PTISETMHEA VLAAFGRALH I
//