LOCUS BAK68159.1 557 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative hydrolase protein.
ACCESSION AP012222-3484
PROTEIN_ID BAK68159.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_34840"
/transl_table=11
BEGIN
1 MSAGESYRER LRASLNSPEF RGARARRYER TVESGMVIER DVRVPTRFGF DIWIDLFRPV
61 EAQGDLPVLV AWTPYGKHDP APLATLFPAS GVQPGWMSDY TIFEAPDPVY WTARGYAVIT
121 ADVPGTWYAE TDAGFFTPRE AEAHYDLIEW AGTQGWSNGK VGLSGVSYLS SCQWRVAALR
181 PPHLAAINIW EGWSDTYSEI VRHGGIPETY FWPYIQTRWG VSDRRVEDLW ALTVEHPHFD
241 AYWRSKVADF GAIDVPAYIV ASWTDHGVHT RGTLEGFKGL SSPRKWLEIH GSKKWGYYYE
301 PPSQARQAAF FDHVLKGEET ELAEWPPVRL HVRDRYAVAT MKSARAWPVE NTRYERLYLD
361 ADTARLSRDT PARVAQCDYD PLDFDGAAMF DFPIAQDVDL VGHMKLRLYV STDAGDDLDL
421 FVAVEKLRAD GRKEGFAHWA VFEDGPVALG WLRVSRRALD TARSTEHQPV LANDRDEKVA
481 PGEIVAVDIE ILPSGTRFLA GETMRLIVKG RDIYNHPKPM LYMRHEDTVN AGRHRIHTGG
541 DTPSYLLIPV VELSDAA
//