LOCUS BAK68143.1 452 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 HlyD family secretion protein protein.
ACCESSION AP012222-3468
PROTEIN_ID BAK68143.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_34680"
/transl_table=11
BEGIN
1 MADQDLDAFL GVKPQPAWRR HLKWVLLALG LLLLLWIALR FFGGSDAPRY VTTPVERGHL
61 VTTVSATGKL APTNQVTVGS QLSGLVVRVL VDVNDRVAEG QPLAEIDPEQ IEDQIRQGRA
121 QLAANQAQVG QAEATLAEAK AQLARLEEVA RLSGGRVPSG TELQAGRANM QRAQAALKVA
181 QANVLASQAS LSQSQTQRAR AIIRSPVSGV VLARQVDPGQ TVAASFNTPT LFVIAEDLSK
241 MKLEVAIDEA DVGAVKEGQS ATFTVDAFPG RTFPATITRV DIGSNLSAST ASASSTTAST
301 AATSSQVVSY AADLSVANAE LELRPGMTAT ADIVTSDKQN VLLVPNAALR FTPSVPVAGQ
361 SSGITGALSI GPRRRNNTER SVTLERGAVQ TVYVKGEDGQ PRAVQITTGD TDGTRTEVLS
421 GDLKPGMEVI VSQLSGAAAA AGGASRRGGG GG
//