LOCUS BAK68138.1 475 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative efflux pump outer membrane
protein protein.
ACCESSION AP012222-3463
PROTEIN_ID BAK68138.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_34630"
/transl_table=11
BEGIN
1 MKASRFLLPM VSALALSACA AGPDYVAPTP PPTSSGPFVS ATSPAFAQAD IQADWWRLYE
61 DPVLDGLIAD ALAANTDVRV AVARLERARA ALRGARSDRL PQTSIDAGAT YGRSPATQRL
121 PGMPRENWSV DGGLSVSYEV DLFGRVSRGV EAARGDADAA AADADAVRVA VVADTTRAYA
181 DAAAGAAQLK VTNEIVSLLD RLLSLTRQRR EAGLATSLDV ARIATLRDQR AADIPRLEAG
241 RQAALFRLAT LTGRTPSALP EIAGQRAIGL EITSPIPIGD GTALLARRPD VRAAERRLAA
301 DTARIGVATA DLYPRVTLGG SVGSTGPDIA DAFGAGPLRW LLGPLISWAF PNQEANRARI
361 AGARADSEAS LAAFDGAVLR ALEETETALS NYARALERRQ SLKAARDSAQ AAARITRAQQ
421 REGAIDSLQL LDTERTFAEA EAALAQQDAF VAQAQIDVFR ALGGGWSDST RLAAS
//