LOCUS BAK68080.1 518 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 peptidase M23B family protein protein.
ACCESSION AP012222-3405
PROTEIN_ID BAK68080.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_34050"
/transl_table=11
BEGIN
1 MFQKIEFNPH QGASIGTLWL NSPARAPAPA VSVGWQGRIG DWANRVELVP DLGRNIGSRI
61 WWRGLFTCVS LCGTTLMLSP GMPVIPGSVP ATLAPSHLDH FRSQMISASA LGGDSGLRMG
121 PTDAVAPLAE TPERPQIELN AALGTGDSFA HTLARSGVSD KDASAVLALV AQAVDPESIA
181 AGTRLQMILG RRPNRNVARP LERLSVRARL ELALEIHRQD GALTLRRIPI AVDNTPLRIR
241 GRVGGSLYRA ARAAGAAPST IQAYLKVLAS QVSVGSLRAE DRFDIIVAHR RAETGEAEVG
301 QLLFAGLERA RGKDINMLKW TQDGRQQWFE ASGVGERRGV LAAPVSGRMS SNYGQRFHPI
361 LGYKRMHAGV DFSAAHGSPI YAVTDGRVNY AGWHGGHGKY VRLQHAGGIG SGYAHMSRIA
421 VKSGQSVRRG QVIGYVGSTG LSTGPHLHYE LYRNGATVNP GSIKFTQVAQ LSGSALAAFK
481 AKIAELKRLP AGPVAERTAQ ATPAPTDNPA GGGVSRTR
//