LOCUS BAK67979.1 777 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 ATP-dependent Clp protease ATP-binding
subunit ClpA protein.
ACCESSION AP012222-3304
PROTEIN_ID BAK67979.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /gene="clpA"
/locus_tag="SLG_33040"
/transl_table=11
BEGIN
1 MPSFAPALET TLHNALAHAT ERSHEYATLE HLLLALIDDE HAAKVMQACG VDLGELGDTV
61 THYLDSELDS LKVTGSVDPS PTSGFQRVVQ RAILHVQSSG KEEVTGANVL VALFSERESY
121 AVYFLQQQDM SRLDAVSYLS HGVGKGAATQ EPPKPPQAEE EKKGETKKKD GALDQFTVNL
181 NEKAKDGKVD PLIGRSAEVD RTIQILCRRS KNNPLYVGDP GVGKTAIAEG LARKIVQGEV
241 PDVLKEAVIY SLDMGSLLAG TRYRGDFEER LKAVVSELEK MPHAVLFIDE IHTVIGAGAT
301 SGGAMDASNL LKPALSGGSI RCIGSTTYKE FRNHFEKDRA LLRRFQKIDV NEPTVEDTIK
361 ILMGLRSAFE DHHAVKYTPD AIKAAVELSA RYINDRKLPD KAIDVIDEVG AMQMLVAPSK
421 RKKMITPKEI EAVIATMARI PPKTVSTDDK SVLESLETDL KRVVFGQDKA IGVLSSAIKL
481 SRAGLRDPDK PIGNYLFSGP TGVGKTEVAR QLATLLGIPL QRFDMSEYME RHSVSRLIGA
541 PPGYVGYDQG GLLTDAIDQN PHCVLLLDEI EKAHPDLFNI LLQVMDNGRL TDHHGKTVDF
601 RNVILIMTTN AGASDMAKES IGFGESTRED VQEEAVKKLF TPEFRNRLDA IVPFDYLPTE
661 VVSRVVDKFV IQLELQLADR DVHITLDNDA REWLTARGYD KLYGARPMGR LIQEKIKQPL
721 AEELLFGKLV NGGEVHVRLK DGALTFEITP AAPRRGKSGP AGKASGKGRK APAPTSR
//