LOCUS BAK67858.1 447 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative Zn-dependent protease PmbA protein.
ACCESSION AP012222-3183
PROTEIN_ID BAK67858.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_31830"
/transl_table=11
BEGIN
1 MLSLNEALDR AQSLVAAARR AGADAADAVY GCDASSGVTV RLGQLEDVEN SESEHIGLRV
61 FVGHRSASVS SSDLAPRTLD TLVERVIAMA REAPEDAYAG LAPEDRLMRK KLPSLDIEDH
121 EIPGPAALRE RALAVEDAAR AVLGVTNSEG GGAGFGRAQV ALVTSHGFAG AYAGTSHSLW
181 ASVLAGEGAG MQRDHASHTA RKLRDLEAAD AIGTRAGSRA VGRLNPKRVA SGTMPVIFDP
241 RVGNSLIGHL IGAISGPAVT RKASFLLDRR GEPVLPATLN LIDNPHLQRG LRSRPFDGEG
301 LPTAMKRIVD GGILTDWLLD SASARQLGLA PTGHATRGGG APGVGLSNVH LEGGTASAHE
361 LMADVSRGLY VTELIGHGVN PVTGDYSRGA SGFLIENGSV GHAVAEVTIA GNLRDMFARL
421 VAANDLSFRY AINVPTLRID GMTIAGE
//