LOCUS BAK67790.1 483 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 succinate-semialdehyde dehydrogenase
[NADP+] protein.
ACCESSION AP012222-3115
PROTEIN_ID BAK67790.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="1.2.1.16"
/gene="gabD"
/locus_tag="SLG_31150"
/transl_table=11
BEGIN
1 MSLNRPDLLR HQAHIDGIWI SGDRKLTVED PATGAALGTV PDLGTSHAEW AVVSAQAALV
61 GWRAKTASER GAVLRRWADL MLAHREDLAR IMTHEQGKPL AEARGEVAYA ASFLTWFGEE
121 ARRTYGDVIP GHGTDKRLMV TREPIGVVAA ITPWNFPLAM ITRKAGPALA AGCTMVVKPS
181 ELTPFSALAL ALLGEEAGIP AGALNIVTGS PREIGNVLVS HPAIAKLSFT GSTAVGKMLA
241 ARCMETVKRV SLELGGNAPF VVFDDADLDA AVEGAIASKF RNAGQTCVCA NRFIVQTGIY
301 DRFVAALKER VQALRVGNGL DEGIETGPLI NGAAIDKVRS HVADALRQGG KLLAGGEAIE
361 GAGHFFQPTL ISDVSATARL CVEETFGPLA GVVRFNTEAE AIALANDTRA GLAAYLYTRD
421 LSRSYRVSEA LQYGMVGLNT GLISTEVAPF GGVKESGFGR EGSRYGMDEY LNMKLICTAV
481 SSA
//