LOCUS BAK67742.1 625 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative vitamin B12 transporter
BtuB precursor protein.
ACCESSION AP012222-3067
PROTEIN_ID BAK67742.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /gene="btuB"
/locus_tag="SLG_30670"
/note="protein synonym:cobalamin receptor"
/note="protein synonym:outer membrane cobalamin
translocator"
/transl_table=11
BEGIN
1 MTRGRRHSAV PVAALGLLMP VPAMAQAIQE TIIVTATGAP QDRDESGQAI SIIDSATIDR
61 SQSWSVGDLL ARLPSVRVNS NGSLGAVTGV SLRGAETGQT LVLIDGVPVN DPGSTADAVD
121 FGNLLVGNIR RIEVMRGSNA VPYGSEAIGG VIDISTRDPD APEGLSLRGS AEGGYAETMR
181 GTADLGWRAG ELRVDAGIAG LRTDGISSAA TRFGASERDG LENWTAHARI EAPLGAGLSL
241 DLRGYAIDAT LDYDSFFGAP ADSADTSKFR QATGYAGLNA SSFGGVLRSR LSVTYLGNRR
301 DYRYAPDGPV EFGYRGENWR IDYRGQVAAA SGVDLMFGYT HDAPNYRFFG FGSDERHEAN
361 TDSVHGMLIL KPTSRLSLTG GVRHDSHSAF GGVTTFGANA NLGLADERTR IRFAYGEGFR
421 TPSLYQLYDT FSGTSDLAPE RSESFDLGMD RRIADGRGRV SLTLFTRTTR NQIDFDMATY
481 RYANLARTRA RGVELEVSVS PVDSLDLALA YSFVDTRDRS LGSLNYDRHL ARRPVHGISA
541 SVDQHWRFGL ATGVSLRMAS DAVDPVAPAG TLDGYVLVDL RASLPISEHI ELYGRLENAF
601 DTDYETAYGY ATYGRAAYGG IRVRI
//