LOCUS BAK67710.1 818 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 conjugal transfer protein TrbE protein.
ACCESSION AP012222-3035
PROTEIN_ID BAK67710.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_30350"
/transl_table=11
BEGIN
1 MMSLREYRNR AAHLADFLPW AALVGEGVVL NKDGSFQRSA WLRGPDLDSA TPAELVATTA
61 RLNNALRRLG SGWAIFVEAQ RTPALDYPES AFPDPVSALV DMERREQFRE EGAHFESAYY
121 LTLLWMPPAE EAARAEGWLY EGRSTTGVDP WELLKGFADR SDRVLNLVEG FVPEVRWLDD
181 AETLTYLHST ISTRRQRVRV PETPMHLDAL LADEPLTGGL EPRLGDHHLR TLTVVGFPSV
241 TFPGLLDELN RLAFEYRWST RALMLDKTDA TKLLTRIRRQ WFAKRKSVAA ILKEVMTNEA
301 STLLDSDASN KAADADTALQ ELGADYAGMA YVTATVTVWD RDPAIAAEKL RLVEKVIQGR
361 DFTVIPEGMN AIEAWLGSLP GHTYANVRQP PISTINLAHL IPLSAVWAGP ERDEHFGQPP
421 LLYGRTEGST PFRFSLHPDG SDVGHTLIVG PTGAGKSVLL ALMAMQFRRY ENAQVFAFDF
481 GGSIRAAAIA CGGDWQDLGG GLSDDSDGGV QLQPLAHIDD PAERAWAAEW LAAILASEGV
541 AVDPQAKEHI WSALGSLASA PPAERTLTGL AVLLQSQQLK QALAPYCIGG PWGRLLDAEA
601 ERLGESDMQA FETEGLVGAG SAAAVLSYLF HRIEGRLDGS PTLIIIDEGW LVLDSPDFAA
661 QLREWLKTLR KRNASVVFAT QSLADIETSS IAPAIIESCP TRIFLPNERA AEPQIAAIYE
721 RFGLNARQIE ILSRATPKRD YYCQSRRGNR LFELGLGEVA LTFAAASSKT DQLAIAEIIE
781 THGQVGFAAE WLRHRGCAWA VELLPSDPQR QPQQELPL
//