LOCUS BAK67704.1 405 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 conjugal transfer protein TrbI protein.
ACCESSION AP012222-3029
PROTEIN_ID BAK67704.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_30290"
/transl_table=11
BEGIN
1 MTDPADNSPP EAAAPQAPRS DPQAFQLRGS TPRVMRLSRK ALAAIGVVAG LGIGGSLIYA
61 LKPVGEKEAK ELYSTDSRAT SETITSGPRD YSQAPKLGPP LPGDLGGPIV SAQQRGENVP
121 VPPVGAQPDP GAQAEEAARQ RAQQERDAAR MSGVFLGGSS AGTAAMPSLP NLAIATPDAA
181 APQPVEAAQA DQAAKRAFMA QASSQRTVSV ERLVAPASPN IVQAGSIIPA ALITGIRSDL
241 PGQITAQVTA NVYDSITGRI LLIPQGARLI GEYDSKVAAG QTRVLLAWDR LIMPDGRSIV
301 LERQPGADAA GYAGLQDRVN QHWGNLLKAA AVSTLLGVGA ELGADSEDDL TRALRRGSQD
361 TINQTGQQIV RRQLNVQPTL TIRPGHPLRV VLMRDLVLEP VGGAR
//