LOCUS BAK67688.1 521 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative integrase protein.
ACCESSION AP012222-3013
PROTEIN_ID BAK67688.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_30130"
/transl_table=11
BEGIN
1 MAEEKSVKLT KTVVDAAGAR SERYEIWDSE LSGFGIRIAT TGRKTFIIRY RAEGGGRTAP
61 RRFMTVGRFG TLTVEQARKK AKELLAAATV GDDPANKRNA KRAEMKMSGL VDRYEQEGCF
121 IQRGKRQGQP MKSLTKKYTI ARLRHHVVPL LGYKRVTEVN AADIERFFRD VEAGKTAKNE
181 KAGPRTRIIV KGGAGAARKV FRDLSAVFSF AKRHEIVAAN PCEKAVVNKS DNKRTRFLTL
241 EEVARLGAAC DALEAEGVNI KALNITRLWV LTGCRRNEIA ELKWDEVDLE NGLLVLDDSK
301 TGKSIRPLCL AAATLLKGIE KVDGKDYVFP ADEGDSYFQG TKNVWPKIVK KAELSGVTPH
361 TLRHTVGATA TSHGEALALT GAILGHANLR STMIYAHVQH DPSVKAANRV GRRIASALAG
421 EIKPTSQKRR KVAGPVPIKE AAPVSNGLLP DAEWDALTEL AALPPEGKGF LASASDPALA
481 MLVKRGFAQA HAGPNDLLAW WQITLIGNAL IKSHTRHKAA A
//