LOCUS BAK67674.1 588 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative helicase protein.
ACCESSION AP012222-2999
PROTEIN_ID BAK67674.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_29990"
/transl_table=11
BEGIN
1 MSFSNLPLVL GDALSEHGYT APTAVQAAVL EAEAHGRDLI VSAQTGSGKT VAFGLALASD
61 LLGDDGLMPP PGKPLALIIA PTRELALQVS REFIWLYGKA GARIATCVGG MDASRERRAL
121 NHGAHIVVGT PGRLRDHLER GALDLAALRG VVLDEADEML DMGFREDLEE ILDATPSERR
181 TLLFSATMPA PIVALARRYQ RDALRISTVS QDRGHGDISY QAMAIAPSDI ENAVVNLLRF
241 HEAETAILFC GTRDNVRHLH ANLVERGFGA VALSGEHSQN ERNQALQALR DRRARVCVAT
301 DVAARGIDLP NLSLVIHVDI PRDAETLQHR SGRTGRAGKK GTAVLIVPYQ RRRRVESMLR
361 GARIPAEWVS PPSADDIRRA DSERLLTTLL APVELDEQDH KLADRLLAER SAHDIAAALV
421 HAHRVRLPAP EDLLGSDAPQ EARQPRAGFE GSAWFRLNIG RRQNAEARWI LPLLCRRGHV
481 SRNEIGAIRI AASETLFEVP GALASRFLDA VRRTANEEDD VEIQPVEGKP RDAARQNRRE
541 ENRPSDGPRP IRARLGRADH GKPDGGKGRK PGPGAGKGGW RKKNGRER
//