LOCUS BAK67664.1 414 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative capsule polysaccharide
export protein protein.
ACCESSION AP012222-2989
PROTEIN_ID BAK67664.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_29890"
/transl_table=11
BEGIN
1 MKYQPIAHRN FLFLQGPPGS FFWSLAERLR DLECGIFRIN LNGGDRADWP GDATDYRGTR
61 RRWTLFIDRF LSEHGITDIV LFGDCRPMHM AAHHMAQLRK IDVHVFEEGY IRPDWLTLEP
121 SGVNGNSSLS RDPQWYLDAA KKLPPLPDRP PITASFRRRA RDAYRYYSQV VLKRPFYPFY
181 TSHRRGSLLL EGFGWLYKFA REKADENHAA KMVARLPEAP YFLFPLQLSN DYQIREHSPF
241 QNMAEAVDYV LYSFARRAPQ HVRLLVKEHP LDANFLSWRR RIEARARRLG IADRVMHIAG
301 GDLALLTEDA CGMVTVNSTS ATLALAAGVP TMALGKAIYD IPQLTHQGRL DDFWTRPQAP
361 NARLFDAFRR VLYDRCLIYG GLASQSATEI LVESAVERLA GDRVSHWAPE LIRA
//