LOCUS BAK67663.1 514 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative capsule polysaccharide
export protein protein.
ACCESSION AP012222-2988
PROTEIN_ID BAK67663.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_29880"
/transl_table=11
BEGIN
1 MNGVTSPAPL AIARAIMAVP PFPGARPHPV VQARSEGRPA PSASPAQLIA ALREQRVGGS
61 FWLPESVWST PDETVSGSGA DPVLLLAAIA GKRIRSESEG PFAILSGMEP GSPDAEGRIE
121 DLVDRYLWRD VAYADPFTGD PVDPVALTDS LADWRNLIDA NRPLAAAFGF AHWKRDTVEP
181 LLWGGHPVPF RSASRSALDA LPPGAAVAVW KARVPPAFLA ELERGPWRIL EVEDGFIRSA
241 GLGADCVPPL SIVVDDLGVH YDPSRPSRLE EMLARDDTSP ADRARAQRLC AWLVREGVSK
301 YGVGGGAAVP RLGGSKRHIL VVGQVEDDRS VLSGGGDVRS NLELLRRVRR DAPDAWIVYR
361 PHPDVEAGHR RGAIPAPVAL SLADAIDAES PISGLIAMSD EVHVITSLAG FEALLQGRAV
421 VTHGTPFFAG WGLTRDLAAP VSRRGKSLSI EALAAAVLLR YPRYLDPVTN LPCPAEIVVR
481 RLLSGVQREN IALVQSRRLV GWARRAFAQL VGTR
//