LOCUS BAK67659.1 570 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 peptidase M28 family protein protein.
ACCESSION AP012222-2984
PROTEIN_ID BAK67659.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_29840"
/transl_table=11
BEGIN
1 MNMRRFPLLA LCALASATAA HGRDAAVPAP AVVANEAAAL VLPPPARVPP ISLNLLRTIT
61 KTLSSDAFEG RAPTTPGEEK TVVYLIDQMQ RAGLKPGNKG SWTQDVPLVE LTPVRTSALA
121 IEGGKAPLHL AYKTDFVAGT YRVVPHSEIA RSEMVFVGYG INAPEKGWND YAGVDVKGKT
181 VVVLVNDPDY EMEGLDGPFD GRAMTYYGRW TYKFEEAARQ GAAGVLLVHD DFPAAYPWGV
241 PLSSWTGPQL GLDLPDGHMD QSAVIGWVTL DAAKQILASA GKDFDQLAEE AKRPGFRARP
301 LGLRASLEVE NSIRKQASRN VIGILPGKTR PDEYVLYSAH WDHLGRCEPV DGDDICNGAL
361 DNASGTAGLI ALAQAHARTG ASARSIVFLA VTAEESGLLG SQYYAENPVF PLTSTVGGVN
421 IDGLNLSGPT RDVVIVGGGK SQLEAFLARA VEAQGRSILP EPSPEKGSFY RSDHFNFAKR
481 GVPMIYATSG EDMVDGGVAA GRAASEDYTA NRYHKPQDEY DPAWNWSGAV QDLQIYYRIG
541 RELATSDLWP NWHPGAEFRA IRDRSREGAK
//