LOCUS BAK67630.1 532 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 protein-export membrane protein SecD protein.
ACCESSION AP012222-2955
PROTEIN_ID BAK67630.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /gene="secD"
/locus_tag="SLG_29550"
/transl_table=11
BEGIN
1 MLDFPRWKIW LVALTTVIGC LFAVPSFLPD RVVAQLPGFM QARVNLGLDL SGGSHILLEA
61 STQDVASQRI QNMEEMIRTE LRRSDARIAI GEMSTRNNQL SFMVRNASQV DAAVERIRPL
121 TQGAGLTGQR DFNVEVRDGN TIVVTPTEAG VANAIESAMQ VATEVIRKRI DEMGTREPTI
181 IRQGSNRIVV QVPGLQDPAA LKDLLGQTAK LEFKLVDTTA NPADLARGIA PIGSEILPYP
241 ENPLGQPVIA VKRQVMVSGD ELIDAQQAYD PQTNAPVVSI RFNGSGANKF ARATQQNVNK
301 PFAMILDGSV LSAPNINEPI LGGSAQISGN FTVASANQLA ISLRSGKLPV KLTVVEERTV
361 GPDLGADSIR KGVLAGVVAT VTVLVLMVAV YGRFGVYANL ALVFNILMIV GVMAIFNATL
421 TLPGIAGFVL TIGAAVDANV LINERIREEQ RRGRSIIQTI ETGYKEAQRA IFDANTTNVI
481 AAALMFYFGS GPIKGFAVVL TIGIITSVFT AVTVTRLFAS FWLRSRPATL NI
//