LOCUS BAK67565.1 1743 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 conserved hypothetical protein protein.
ACCESSION AP012222-2890
PROTEIN_ID BAK67565.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_28900"
/transl_table=11
BEGIN
1 MRGVSKNAST PIRSCRAARN ERGKKERFAM TNNGDFEPDV CIVTPVFNGS DYIDETIASV
61 IMQAGDFYLR YHIQDGGSTD DTLAIVERWH NLVTTGALPM TCKGLEFTYS SERDAGMYDA
121 INRGFQKILP SVGNPMMGWI NADDRIAQGG LATGLSICRA MPEVRLFGGR VALINQHGYN
181 LGINLPISYS RPCMAAGLYD GRSLPFVMQE GTFWRADLWH QCGGLDDRLK LAGDWDLWRR
241 FAEYTEYFSA DTVLGFHRRR PGQLSGQMDK YYAEVDMVLS EIHQIEFQEL SNKEKVFSSV
301 APKIVAIRQR YEELLFNRHE MERSEYASTV LRFNLADGAW GRMRGYGLPS GPAEVSGSYG
361 TALSIKGQFV SGFSAPEGPH PEFSIPFGMR WLTGEQGLLT AEIEESGRYD IVFRFRAWGN
421 GRTVAISVNG RLGFSGLIRP YEHDRETEVR ISSFLPVGLC AIELKVEAEE GAVNLMVMDM
481 RIDPILERGT GKVVPVSSLP SPVATVGGRA PLGGEWPRIS VIVPTRNQAH FIGDTMRSLV
541 RQGYPNLEII VCDGASTDET TQVLREFERH ITYYISEPDE GQSHAINKGM AAASGDILTW
601 LNSDDLLASG ALHAVAFAFL TEGVDMVSGV CDVFGDDGAV MHRHLPCLQS GPLPLNDLLD
661 LENCWLRGQF FHQPEVFFSR AIWEKAGGLV RENLYYSMDY DLWVRMAQAG ARIQLIGRTV
721 AYYRMHADQK TSTVEAYRPE LTSHASMLRA EAGMSSMPAR REDLASHLKI LMLNDYGFNY
781 GAGIAHRRLA QALQLAGQDV VAVGYAEFDR ARPDGFDPEL IRSAIDEHQP DLIVAGNLHS
841 IRSGPEPLEV LLSLGVPVVF FAHDQWIVTG RCAYTGGCPK FLSGCDEACP TAAEYPSLPP
901 REIAPSFRAK RALIEKASQD GRLMIVTNSR YMERFIKEAA GEPLASHVRT VALGVDTRLF
961 THGRRREARQ ILGLPQDRFI ILTAASNIDD ERKGLPLLIE ALKGRTDLHD VVLVIIGWGK
1021 SIPETPCEVR FTGYAQDERL VALYFQAADI FVGPSKEEAL GQTFIEAGAC GTPSVTFNLG
1081 GIPDAVVDGV TGLLVEQRSA EPLGEAIADI KRDAAMRRSM GANAVLHVRN RFSLERAAAD
1141 FLSMLVTCKF GKPLAPSVNL RADGVRPVRF HYLAEKASEV LLPETPSWFP VAAIESRFLE
1201 GDGSLLEHAF VAVAPRGVLA AEAVRDASYK MRLGYRMVTE RQRLTIVVND TRGLQYELKY
1261 AAGGDQEIDL PLRLRKGYNR IIIEFSEMSD NDIALIISSL EFKNDGDGFE NNIDGLVSYG
1321 HNFGEVEGPY PEFQIDSKFR WALGDESALQ IFSACEGERE LRFGIRNFYS DQVLGIDIDG
1381 EQKVSVEIGS ANASDVQYIV VRHFFHEGFA DITFRPSVSR LERENGRSLS FALSSVEFGD
1441 RLGDRLSPVL KSAVQGSLPA HLPNTQLIGD LEEGSGFGPL RGPFPELGIM EPVRWITSAS
1501 AVLTVNATGV SEAVLTMRYR MVAKRAIASL DVNGEVHDLV LTSPGALSGA AEVKVDIRLI
1561 DGPNILTFAF SGLDFESVDG HPRVLLLESL TIVDMASGVA MSDATSSEAV SSYARVRMGS
1621 GIADAEAAYP PLGLEAPFYW VCDTKARLKV EGNGCNSRVR IAMRNQERGQ RISVVQDGEL
1681 LVQSDVLPDT LDVSSEIQCD LYLAPGWNTL DLIASSVSPP SGQETRSLSF LIESIEVTDL
1741 EFA
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