LOCUS BAK67542.1 470 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative GntR family transcriptional
regulator protein.
ACCESSION AP012222-2867
PROTEIN_ID BAK67542.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_28670"
/transl_table=11
BEGIN
1 MSVAERIYTA STREDESPSR LAEQLARQIE DDIAWQRLTA GEALGSLRDL SDRYSVGRAV
61 IREAVGLLER RGLGSLRPGP CGGFIVKTPL AQSIGEEIAD YFRTADITLA HLLDAREAVD
121 HMIARLAALA RPPLPRLVRL EAAVRTPGLG GHLALRNELA RLTGEPVVML LIKCLNSLTL
181 DFAMDGAAPG DQPRIAIATM REALANGDTE MAVQEADRLH DELTRHLHPQ KASQDIRPIE
241 SARLADERTL AVSVARKLAV EIARSGTTGQ RLGSEWDLCE RFSVSRLTLR QAIRILQDSG
301 LVECRRGRGN GLVVRNRRGT GTIRLMLAYL IGQQMDVRAA GTILFQLNCF MPALAVSRAD
361 SEQRRALERL ISRLEESDTL ERYDLLSLVQ CVSQLAQSPI IDLFSRCLAA YEARFHPSLA
421 ERLPVGLQAS YFRLVRQLLN GTSADGRTEL EWAKARSAHV MLEMSRSRPI
//