LOCUS BAK67472.1 492 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative dioxygenase protein.
ACCESSION AP012222-2797
PROTEIN_ID BAK67472.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_27970"
/transl_table=11
BEGIN
1 MASFPDTIHF TGLNTPVRIE WNAHDLDVIG EIPREIDGAF FRAVPDPAYP PKFDDEIVLS
61 GDGMISRFGI RDGKVDFAIR YVETARYKAE KAAGRSLFGK YRNPFTDDAE VQGIDGTVSN
121 TTPVWHAGRL FMTKEDGLAY EIDPETLETI GRWDYHGALK SQTFTAHPRV DPATGEMFFF
181 GYEAGGLCTP DVAYCIADKD GNLVSEQWFQ QPYCSTIHDF AITGKYAVFP IFPTTADLDR
241 LKAGGAHWAH QQELESWVGI MPRYGKVEEM RWFKGPRGVS AFHFVNAYDD GDLVHLDICL
301 SDTNAFAFMR EAGGIHRAQN ELGGGLVRWT FNLASDEEGF ESRVIGPPGD MPRLRDADQG
361 RAYRAAWYLT INPQGGAPLP GGPVGAAFNA MLRIEPGNGR IDMMPLEPGL AISEPVHVPS
421 SEPDHEGWLL AVIDRQLDTG RFASELWVVN AGDIAAGPVA RVLIPVPMRA QIHGAWVSRE
481 RLAEARARAA AA
//