LOCUS BAK67464.1 789 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 TonB-dependent receptor-like protein protein.
ACCESSION AP012222-2789
PROTEIN_ID BAK67464.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_27890"
/transl_table=11
BEGIN
1 MTTIFLRGCT SAFVIAAASL GASQAWAQGA AAGAPAPQEE RVDAAEGDIV VTAQRRSERL
61 QDVPISVSVV GGERLARDNL TSLSAVADRL ANVRITPGPF DQLNIRGIGS SNNTGFEQSV
121 ATFVDGVYRS RPRAIRAALF DVERVEVLKG PQTTFFGNNA IAGALNITTR KPGNAFEANA
181 SALYGTYGEY NVEAGVTAPL GEMLSVRLAG RLSGMDGFVK NEFTGKDGPR ERNRVGRASI
241 AFTPSANFRS DLRFDTGKMS AQDFLPFELE HCPPPSPFPV GGSCANYIAA NGGPVDDELN
301 WRNSSRPGKL DYSFNELGWT NSLSIGDYTL NAITGYFDHD TEYLQQLIPS PVPGIGGGSL
361 LPVFQRETFS QWSQEIRLVS PTGGFLEWQL GAYYGSSKMR NNGVTGFFFA PFGASAPPYT
421 AQTPVAGRLT VHEDATTKSV FGAATLRPAD RVKLNLGLRY SVVSKDAFRA LHNGTADPNF
481 PTPENYVPAS KAVSDTLNAI LGSNNMDFPD PSREDDKLMP SVSVQFDATP DLTAYASYTK
541 GFKAGGYSGG SAGGDFGPET VNAYEVGLKG NLFARQVTFS LSAFRGDYSG LQESVSETLP
601 SGTVRVSVAN AASARSQGVE FSASWRMTSW LTASTDLAYL DAIYLNYDGA PCSSIQTLLG
661 ASAGCVGRRQ DLSGKRRGFA PEWTGNVRLD ATIPAGDMQV RISPLLYFSS WYFQSSTADD
721 LIRQKGYAKV DLRVGVGPQD DRWSVAVIGQ NLTDRATAGF RQTVSGANGS VSALAERPRT
781 VAVQLTARY
//