LOCUS BAK67447.1 839 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 nitrite reductase (NAD(P)H) large
subunit protein.
ACCESSION AP012222-2772
PROTEIN_ID BAK67447.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="1.7.1.4"
/gene="nirB"
/locus_tag="SLG_27720"
/transl_table=11
BEGIN
1 MDFQDYQPRE GADEPADRFS GDPREHLVVV GNGMAGCRAI EELLARDAGR YRITIFGAEQ
61 HVNYNRIMLS PVLAGEKTFD EIIINGHDWY RDNGITLITD DPVVSIDRAS ATVTSRSGCT
121 LGYDRLLIAT GSDPFIIPVP GKDLPGVVSF RDMKDVGTML AAAEKGGAAV VIGGGLLGLE
181 AAHGLALRGM NVTVLHLPGS LMERQLDEAA GWLLKTALEE RGQTILTGAD TAEIYGDGKV
241 EGVRLKDGRE IPASLVVMAV GIRPSVALAR EAGLEVGRGI KVDDHMVTND PSILAVGECA
301 EHDGNVYGLV APLWDMCRSF ADGLTGKANP YRRSATSTKL KVAGLDVFSA GDFSGVGGGC
361 EDIVLRDASR GIYKRLVLQD DRIIGAVLYG DTADGSWYFD LLRKGECVAD LRDVLIFGQA
421 FASGGGAADP KAAVAALSDD AEICGCNGVS KGQVLSSIAR GAHSLDAVRA TCKASASCGS
481 CTGLVETLLA ITLGDDVQAG SRTMCKCTTF THDDVRREIV AQDMRSIPEA MQKLHWFTPD
541 GCSSCRPALN YYLLCALPGA YVDDQQSRFV NERMHANIQK DGTYSVVPRM WGGLTNPREL
601 RAIADVVEKY DAPMVKVTGG QRLDIFGIRK EDLPAVWADL NAAGMVSGHA YGKSLRTVKT
661 CVGSEWCRFG TQDSTGLGVR IERMTWGSWM PHKFKIAVSG CPRNCAEATI KDFGVVCLDS
721 GYELSVGGNG GIKVRATDLL CRVATEQEAL DYCAAFIQLY REEARYLERT APWIERVGID
781 YVKQRIVEDD IGREALRARF LFSQSFSQDD PWAQRAEGVE REQHAHMAQF RPARLEEMA
//