LOCUS BAK67439.1 844 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 TonB-dependent receptor-like protein protein.
ACCESSION AP012222-2764
PROTEIN_ID BAK67439.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_27640"
/transl_table=11
BEGIN
1 MNSRILLIGG TAMALLATSS ANGQTAQTGS EASETDIVVT AQFRAQNLQD TPIAITAVNA
61 GMLEARSQTD ISQVANQAPS VTLKPQGAAY GPSLSANIRG VGQTDFNPAL EPGVGFYVDD
121 VYYATLTGSI IDLLDLDRVE VLRGPQGTLA GRNSIGGAVK LYSKKPEGSN TGYVAATYGI
181 RNRLDLRGSA DFHVASGIDA RISGVAKKQE GYVDRLDFGC LYPAGGTATF TPAFPTASNP
241 NQTPMLMNPV GGIPARTNRG DCVLAKEGEV GYIAMRGQLR VRPTDTLDIN IIGDYTDDDR
301 VAAGSVLLLR QYPNGAVASP RFPLPLIPAT GSSPPQNYAA ASPPGRDINP FAAPDTLLAY
361 DNRFVCGQYC NFGTYDMPAD GNFRASSGDG RVRFKGWGVS GQIEWALADH LQLNSITAFR
421 RYTSNFSNDN DVSPMAHSLG YGPLTFRFFS QELRLNGQIG STIDYTVGAY YSDQKSVYTS
481 FQDLRSSNLQ FQQSDPVDAD SKAVFAHLSW NPIDPLTLTG GIRYTKESKT YQYIRQRPYL
541 DPTSVTANGV LPLNGTIGKF SGERVDYRAN VQYAFSNDVM AYAQFSTGFK GGGVNPRPFF
601 VQQALSFGPE TLNAYELGLK TDFFDRRLRL NVATFLSKYK GIQLSLSNCT AITGAGFGAP
661 CALPVNAGDA DIKGVEVEAT IRPVDGLLID GAVSYLDFEY TRFGTYTVGT TTVAVGGPTN
721 LNGPQFGDYA PYTPKWKWSA GAQYEIDLGT AGSLTPRIDA SFQSKIYTVS ANRSSNRIDA
781 YTVANARLTW RNDEEDLDVS LEVTNLFDEY YLLTIYDQTV GGQGYSSGQP GRPREWAVTV
841 RKKF
//