LOCUS BAK67388.1 416 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 HlyD family secretion protein protein.
ACCESSION AP012222-2713
PROTEIN_ID BAK67388.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_27130"
/transl_table=11
BEGIN
1 MDQVVESRRL PARLKLIGGA VALALLGAGF WWFAPSGASQ TVQSAQLAIS EVKRGTFDDF
61 IPQRAKVTPL LTVFIDSLEG GRVDRILVED GAVVRKGQLI AVLSNADLQL STLRDQAEVE
121 QQINAMRSQE LALSQTQLAD ERAVLESHLA MEKAKRQLDL ESPLAEQGFV SRRQFADTQD
181 QYDFEVRRAA VLRRTEQSNT QMQGRQLAQL RESVESLQSS LQLAHMNLEA LNLRAPVDGQ
241 LSGFNIQVGQ SLQRGERIGQ IDSPGHNKLQ AGVDEYYLGR VSLGQRAAID WGGKHYTARV
301 TKIYPQVQNG QFQVDLQFIG AEPEQIQRGQ SLQARLTLSD PTPALLLPSG GFYNDTQGAW
361 VFVVAPNGRS AERRNVRLGR RNSDYIEVLD GLSPRERVIT SPYTGFTDKS RLDLAK
//