LOCUS BAK67277.1 815 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 conjugal transfer protein TrbE protein.
ACCESSION AP012222-2602
PROTEIN_ID BAK67277.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_26020"
/transl_table=11
BEGIN
1 MLNLREYRHR ADRLADHLPW AGLVADGVVL NKDGSFQRTL AFRGPDLGSA TEAELISACA
61 RANNVLKRFG TGWALFFEAE RRESQGYPDS AFPDAASWLL DEERRAGFEG EGEHYESRFH
121 LTLVWLPPAD SSDAAGRSLV ERPDAHEGRD WRSVLASFVA ETDRALDLFG AFMPEMRALS
181 SAETLTYLHG AISERPHPIA MPDTPIYLDG LLADTPLIGG LEPMLGLSHI RTLTVTGFPN
241 MSRPGILDAL NEAAFPYRWV TRFISLDKAD ATRVLTRLRR QWFNKRKSIT ALLREVMYNQ
301 PAQLLDSDAD NKVIDADLAL QALGGDHVAF GYLTATITVA DEDRVRVEDK VRNVERIING
361 LGFTTIREGV NAVEAWLSSL PGQTYANVRQ PIVHTLNLAH LMPLSSVWAG PARNAHLDGP
421 PLLVAQTAGS TPFRLSTHVG DVGHMMVVGP TGAGKSVLLA LIALQFRRYA ASQIYIFDMG
481 RSARAATLAC GGAHHALGSG DDEGGLAFQP LRAIDDMAER AWASEWIVAL LDQQKVVVDP
541 AIKEAVWSAL GSLASAPPDE RTITGLALLL QSNALRSAIA SYTLEGPYGR LLDAAESRLA
601 LADMQCFETE TLMNSTGAVA PVLTYLFHRL EERFDGRPTL LILDEAWKFL DHPLFAARIR
661 EWLKTLRKKN VGVVFASQSL ADVAESSIAP AIIESCPQRI LLPNDRAIEP QARAAYERFG
721 LNDRQIELIA RATPKRHYYL QSARGNRLFE LGLGPIALAL CGASDPATQE RIDSILAEQG
781 PDQFATHFLA STGLDWAAEL LADFTAPHAP KEGVL
//