LOCUS BAK67272.1 402 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 conjugal transfer protein TrbI protein.
ACCESSION AP012222-2597
PROTEIN_ID BAK67272.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_25970"
/transl_table=11
BEGIN
1 MSEAALQPAP KVDPETLVLR ARPPRAIRFR RGIIIAIAAI GSASLIAVAW LALKPRIFRH
61 LDAQEELSQP NARLTSDALR GAPASYGDVP RLGPPLPGDL GRPILEHQQA MAAMAGPIDQ
121 QAQQIDAANS ERRIAEQKAA RESDVLVQSR QGSGTVDSLP AVPAAPAPAS SADNGKVALD
181 PERDPNAQGR KAEFVSGLDP RGDTNPHPLV PAPSPYTLSA GSVIAASLIT GIRSDLPGLV
241 TAQVTENVYD SATGGILLVP QGARLIGSYD SVVAFGQKRA LVVWQRIMLP DGSSLRIDNV
301 PATDPSGYAG LQDKVDFHTW QLLKGVALST LLGVSSELAF SGQSDLVKAL RMATQDTVSR
361 AGDRITQRNL NIQPTITIRP GAPVRLVVHK DLILAPWHEQ GD
//