LOCUS BAK67221.1 415 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 diaminopimelate decarboxylase protein.
ACCESSION AP012222-2546
PROTEIN_ID BAK67221.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_25460"
/transl_table=11
BEGIN
1 MTMKVKPMGP IPPGFQSEQG MLLIGGRGAA ALVDEAGDTP LFAYDAGMIR ARIAALREVM
61 PHGVDLHYAM KANPFPPLLA LMAGLVDGFD IASSGELSLA LGAHVAGERI SFAGPGKQDR
121 ELEAAIAAGV AINLESEGEA ARALAIGQRL GVRPRLAVRV NPDFELKGSG MRMGGGARPF
181 GVDADRAAAL ARHVIAQGAL WRGWHIFAGS QSLDAEAIIA AQSQTVALAA RLSEEVGAAP
241 PLVNLGGGFG VPYFPGDMPL DIGLIGTALG ETLESRPAIL AESRFALELG RYLVAEAGVY
301 LTRVVDVKTS HGERFAVVDG GLHHQLAASG NFGTVVRRNY PLAIANRFDG PICAEPLTVI
361 GCLCTPLDRL GDSLALPPVE PGDLVAVFLA GAYGASASPS AFLGHAPAME LLVED
//